Gene : AT4G25730 A. thaliana TAIR10
Defline:  (1 of 1) 2.1.1.167 - 27S pre-rRNA (guanosine(2922)-2'-O)-methyltransferase Genomic Order:  2572
Name:  ? AT4G25730 Secondary Identifier:  ? PAC:19643814
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25730 0.5kb upstream 0.5kb upstream 4602 true Chr4: 13102679-13107280 Arabidopsis thaliana
AT4G25730 0.5kb upstream 0.5kb upstream 500 false Chr4: 13106781-13107280 Arabidopsis thaliana
AT4G25730 0.5kb downstream 0.5kb downstream 4602 true Chr4: 13102179-13106780 Arabidopsis thaliana
AT4G25730 0.5kb downstream 0.5kb downstream 500 false Chr4: 13102179-13102678 Arabidopsis thaliana
AT4G25730 1.0kb upstream 1.0kb upstream 5102 true Chr4: 13102679-13107780 Arabidopsis thaliana
AT4G25730 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13106781-13107780 Arabidopsis thaliana
AT4G25730 1.0kb downstream 1.0kb downstream 5102 true Chr4: 13101679-13106780 Arabidopsis thaliana
AT4G25730 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13101679-13102678 Arabidopsis thaliana
AT4G25730 2.0kb upstream 2.0kb upstream 6102 true Chr4: 13102679-13108780 Arabidopsis thaliana
AT4G25730 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13106781-13108780 Arabidopsis thaliana
AT4G25730 2.0kb downstream 2.0kb downstream 6102 true Chr4: 13100679-13106780 Arabidopsis thaliana
AT4G25730 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13100679-13102678 Arabidopsis thaliana
AT4G25730 5.0kb upstream 5.0kb upstream 9102 true Chr4: 13102679-13111780 Arabidopsis thaliana
AT4G25730 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13106781-13111780 Arabidopsis thaliana
AT4G25730 5.0kb downstream 5.0kb downstream 9102 true Chr4: 13097679-13106780 Arabidopsis thaliana
AT4G25730 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13097679-13102678 Arabidopsis thaliana
AT4G25730 10.0kb upstream 10.0kb upstream 14102 true Chr4: 13102679-13116780 Arabidopsis thaliana
AT4G25730 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13106781-13116780 Arabidopsis thaliana
AT4G25730 10.0kb downstream 10.0kb downstream 14102 true Chr4: 13092679-13106780 Arabidopsis thaliana
AT4G25730 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13092679-13102678 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362243 5261 Brassicaceae View MSA
123831880 5264 Brassicales-Malvales View MSA
124339310 5266 SBM View MSA
124242070 5268 Malvidae View MSA
124066192 5270 Rosid View MSA
123747132 5271 Pentapetalae View MSA
122787166 5272 Eudicot View MSA
122043455 5273 Angiosperm View MSA
121347110 5274 Embryophyte View MSA
123425494 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.955        
cufflinks 20.481        
cufflinks 12.501        
cufflinks 21.96        
cufflinks 10.251       Low
cufflinks 26.347       High

0 Strain