Gene : AT4G25580 A. thaliana TAIR10
Defline:  (1 of 3) PTHR33836:SF1 - ARM REPEAT SUPERFAMILY PROTEIN-RELATED Genomic Order:  2554
Name:  ? AT4G25580 Secondary Identifier:  ? PAC:19646501
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25580 0.5kb upstream 0.5kb upstream 3119 true Chr4: 13055684-13058802 Arabidopsis thaliana
AT4G25580 0.5kb upstream 0.5kb upstream 500 false Chr4: 13055684-13056183 Arabidopsis thaliana
AT4G25580 0.5kb downstream 0.5kb downstream 3119 true Chr4: 13056184-13059302 Arabidopsis thaliana
AT4G25580 0.5kb downstream 0.5kb downstream 500 false Chr4: 13058803-13059302 Arabidopsis thaliana
AT4G25580 1.0kb upstream 1.0kb upstream 3619 true Chr4: 13055184-13058802 Arabidopsis thaliana
AT4G25580 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13055184-13056183 Arabidopsis thaliana
AT4G25580 1.0kb downstream 1.0kb downstream 3619 true Chr4: 13056184-13059802 Arabidopsis thaliana
AT4G25580 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13058803-13059802 Arabidopsis thaliana
AT4G25580 2.0kb upstream 2.0kb upstream 4619 true Chr4: 13054184-13058802 Arabidopsis thaliana
AT4G25580 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13054184-13056183 Arabidopsis thaliana
AT4G25580 2.0kb downstream 2.0kb downstream 4619 true Chr4: 13056184-13060802 Arabidopsis thaliana
AT4G25580 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13058803-13060802 Arabidopsis thaliana
AT4G25580 5.0kb upstream 5.0kb upstream 7619 true Chr4: 13051184-13058802 Arabidopsis thaliana
AT4G25580 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13051184-13056183 Arabidopsis thaliana
AT4G25580 5.0kb downstream 5.0kb downstream 7619 true Chr4: 13056184-13063802 Arabidopsis thaliana
AT4G25580 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13058803-13063802 Arabidopsis thaliana
AT4G25580 10.0kb upstream 10.0kb upstream 12619 true Chr4: 13046184-13058802 Arabidopsis thaliana
AT4G25580 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13046184-13056183 Arabidopsis thaliana
AT4G25580 10.0kb downstream 10.0kb downstream 12619 true Chr4: 13056184-13068802 Arabidopsis thaliana
AT4G25580 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13058803-13068802 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363938 5261 Brassicaceae View MSA
123798651 5264 Brassicales-Malvales View MSA
124349690 5266 SBM View MSA
124251939 5268 Malvidae View MSA
124069753 5270 Rosid View MSA
123745202 5271 Pentapetalae View MSA
122785813 5272 Eudicot View MSA
122050504 5273 Angiosperm View MSA
121311951 5274 Embryophyte View MSA
123349176 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low  
cufflinks 0.012     Low  
cufflinks 0.129     Low High
cufflinks 0.018     Low  
cufflinks 0.033     Low  
cufflinks 0.006     Low Low

0 Strain