Gene : AT4G25560 A. thaliana TAIR10
Defline:  (1 of 3) PTHR10641:SF563 - MYB TRANSCRIPTION FACTOR-RELATED Genomic Order:  2552
Name:  ? AT4G25560 Secondary Identifier:  ? PAC:19648665
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25560 0.5kb upstream 0.5kb upstream 1564 true Chr4: 13052055-13053618 Arabidopsis thaliana
AT4G25560 0.5kb upstream 0.5kb upstream 500 false Chr4: 13052055-13052554 Arabidopsis thaliana
AT4G25560 0.5kb downstream 0.5kb downstream 1564 true Chr4: 13052555-13054118 Arabidopsis thaliana
AT4G25560 0.5kb downstream 0.5kb downstream 500 false Chr4: 13053619-13054118 Arabidopsis thaliana
AT4G25560 1.0kb upstream 1.0kb upstream 2064 true Chr4: 13051555-13053618 Arabidopsis thaliana
AT4G25560 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13051555-13052554 Arabidopsis thaliana
AT4G25560 1.0kb downstream 1.0kb downstream 2064 true Chr4: 13052555-13054618 Arabidopsis thaliana
AT4G25560 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13053619-13054618 Arabidopsis thaliana
AT4G25560 2.0kb upstream 2.0kb upstream 3064 true Chr4: 13050555-13053618 Arabidopsis thaliana
AT4G25560 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13050555-13052554 Arabidopsis thaliana
AT4G25560 2.0kb downstream 2.0kb downstream 3064 true Chr4: 13052555-13055618 Arabidopsis thaliana
AT4G25560 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13053619-13055618 Arabidopsis thaliana
AT4G25560 5.0kb upstream 5.0kb upstream 6064 true Chr4: 13047555-13053618 Arabidopsis thaliana
AT4G25560 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13047555-13052554 Arabidopsis thaliana
AT4G25560 5.0kb downstream 5.0kb downstream 6064 true Chr4: 13052555-13058618 Arabidopsis thaliana
AT4G25560 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13053619-13058618 Arabidopsis thaliana
AT4G25560 10.0kb upstream 10.0kb upstream 11064 true Chr4: 13042555-13053618 Arabidopsis thaliana
AT4G25560 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13042555-13052554 Arabidopsis thaliana
AT4G25560 10.0kb downstream 10.0kb downstream 11064 true Chr4: 13052555-13063618 Arabidopsis thaliana
AT4G25560 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13053619-13063618 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378092 5261 Brassicaceae View MSA
123839263 5264 Brassicales-Malvales View MSA
124342600 5266 SBM View MSA
124244304 5268 Malvidae View MSA
124067313 5270 Rosid View MSA
123750706 5271 Pentapetalae View MSA
122786386 5272 Eudicot View MSA
122049039 5273 Angiosperm View MSA
121311219 5274 Embryophyte View MSA
123348543 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.027     Low  
cufflinks 1.024        
cufflinks 0.02     Low Low
cufflinks 2.02        
cufflinks 0.056     Low  
cufflinks 2.133       High

0 Strain