Gene : AT4G25400 A. thaliana TAIR10
Defline:  (1 of 6) PTHR13935//PTHR13935:SF54 - ACHAETE-SCUTE TRANSCRIPTION FACTOR-RELATED // TRANSCRIPTION FACTOR BHLH118-RELATED Genomic Order:  2534
Name:  ? AT4G25400 Secondary Identifier:  ? PAC:19645607
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25400 0.5kb upstream 0.5kb upstream 1674 true Chr4: 12980795-12982468 Arabidopsis thaliana
AT4G25400 0.5kb upstream 0.5kb upstream 500 false Chr4: 12980795-12981294 Arabidopsis thaliana
AT4G25400 0.5kb downstream 0.5kb downstream 1674 true Chr4: 12981295-12982968 Arabidopsis thaliana
AT4G25400 0.5kb downstream 0.5kb downstream 500 false Chr4: 12982469-12982968 Arabidopsis thaliana
AT4G25400 1.0kb upstream 1.0kb upstream 2174 true Chr4: 12980295-12982468 Arabidopsis thaliana
AT4G25400 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12980295-12981294 Arabidopsis thaliana
AT4G25400 1.0kb downstream 1.0kb downstream 2174 true Chr4: 12981295-12983468 Arabidopsis thaliana
AT4G25400 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12982469-12983468 Arabidopsis thaliana
AT4G25400 2.0kb upstream 2.0kb upstream 3174 true Chr4: 12979295-12982468 Arabidopsis thaliana
AT4G25400 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12979295-12981294 Arabidopsis thaliana
AT4G25400 2.0kb downstream 2.0kb downstream 3174 true Chr4: 12981295-12984468 Arabidopsis thaliana
AT4G25400 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12982469-12984468 Arabidopsis thaliana
AT4G25400 5.0kb upstream 5.0kb upstream 6174 true Chr4: 12976295-12982468 Arabidopsis thaliana
AT4G25400 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12976295-12981294 Arabidopsis thaliana
AT4G25400 5.0kb downstream 5.0kb downstream 6174 true Chr4: 12981295-12987468 Arabidopsis thaliana
AT4G25400 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12982469-12987468 Arabidopsis thaliana
AT4G25400 10.0kb upstream 10.0kb upstream 11174 true Chr4: 12971295-12982468 Arabidopsis thaliana
AT4G25400 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12971295-12981294 Arabidopsis thaliana
AT4G25400 10.0kb downstream 10.0kb downstream 11174 true Chr4: 12981295-12992468 Arabidopsis thaliana
AT4G25400 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12982469-12992468 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379395 5261 Brassicaceae View MSA
123802246 5264 Brassicales-Malvales View MSA
124351097 5266 SBM View MSA
124249323 5268 Malvidae View MSA
124073139 5270 Rosid View MSA
123750941 5271 Pentapetalae View MSA
122792125 5272 Eudicot View MSA
122050150 5273 Angiosperm View MSA
121311764 5274 Embryophyte View MSA
123349017 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 10.914        
cufflinks 0.018     Low Low
cufflinks 16.703        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 5.135        

0 Strain