Gene : NUDT10 A. thaliana TAIR10
Primary Identifier:  ? AT4G25434 Defline:  (1 of 2) PTHR13994:SF14 - NUDIX HYDROLASE 2
Genomic Order:  2539 Name:  ? AT4G25434
Secondary Identifier:  ? PAC:19647640
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-5381 Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25434 0.5kb upstream 0.5kb upstream 2388 true Chr4: 13003976-13006363 Arabidopsis thaliana
AT4G25434 0.5kb upstream 0.5kb upstream 500 false Chr4: 13005864-13006363 Arabidopsis thaliana
AT4G25434 0.5kb downstream 0.5kb downstream 2388 true Chr4: 13003476-13005863 Arabidopsis thaliana
AT4G25434 0.5kb downstream 0.5kb downstream 500 false Chr4: 13003476-13003975 Arabidopsis thaliana
AT4G25434 1.0kb upstream 1.0kb upstream 2888 true Chr4: 13003976-13006863 Arabidopsis thaliana
AT4G25434 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13005864-13006863 Arabidopsis thaliana
AT4G25434 1.0kb downstream 1.0kb downstream 2888 true Chr4: 13002976-13005863 Arabidopsis thaliana
AT4G25434 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13002976-13003975 Arabidopsis thaliana
AT4G25434 2.0kb upstream 2.0kb upstream 3888 true Chr4: 13003976-13007863 Arabidopsis thaliana
AT4G25434 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13005864-13007863 Arabidopsis thaliana
AT4G25434 2.0kb downstream 2.0kb downstream 3888 true Chr4: 13001976-13005863 Arabidopsis thaliana
AT4G25434 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13001976-13003975 Arabidopsis thaliana
AT4G25434 5.0kb upstream 5.0kb upstream 6888 true Chr4: 13003976-13010863 Arabidopsis thaliana
AT4G25434 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13005864-13010863 Arabidopsis thaliana
AT4G25434 5.0kb downstream 5.0kb downstream 6888 true Chr4: 12998976-13005863 Arabidopsis thaliana
AT4G25434 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12998976-13003975 Arabidopsis thaliana
AT4G25434 10.0kb upstream 10.0kb upstream 11888 true Chr4: 13003976-13015863 Arabidopsis thaliana
AT4G25434 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13005864-13015863 Arabidopsis thaliana
AT4G25434 10.0kb downstream 10.0kb downstream 11888 true Chr4: 12993976-13005863 Arabidopsis thaliana
AT4G25434 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12993976-13003975 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363339 5261 Brassicaceae View MSA
123837440 5264 Brassicales-Malvales View MSA
124351167 5266 SBM View MSA
124247801 5268 Malvidae View MSA
124071917 5270 Rosid View MSA
123746480 5271 Pentapetalae View MSA
122788941 5272 Eudicot View MSA
122049902 5273 Angiosperm View MSA
121347954 5274 Embryophyte View MSA
123428722 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.299       Low
cufflinks 9.154        
cufflinks 0.374        
cufflinks 8.517        
cufflinks 0.399        
cufflinks 6.468        

0 Strain