Gene : AT4G25250 A. thaliana TAIR10
Defline:  (1 of 5) PTHR31080:SF2 - F23N19.14-RELATED Genomic Order:  2517
Name:  ? AT4G25250 Secondary Identifier:  ? PAC:19644336
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Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-1081 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25250 0.5kb upstream 0.5kb upstream 1312 true Chr4: 12934062-12935373 Arabidopsis thaliana
AT4G25250 0.5kb upstream 0.5kb upstream 500 false Chr4: 12934062-12934561 Arabidopsis thaliana
AT4G25250 0.5kb downstream 0.5kb downstream 1312 true Chr4: 12934562-12935873 Arabidopsis thaliana
AT4G25250 0.5kb downstream 0.5kb downstream 500 false Chr4: 12935374-12935873 Arabidopsis thaliana
AT4G25250 1.0kb upstream 1.0kb upstream 1812 true Chr4: 12933562-12935373 Arabidopsis thaliana
AT4G25250 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12933562-12934561 Arabidopsis thaliana
AT4G25250 1.0kb downstream 1.0kb downstream 1812 true Chr4: 12934562-12936373 Arabidopsis thaliana
AT4G25250 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12935374-12936373 Arabidopsis thaliana
AT4G25250 2.0kb upstream 2.0kb upstream 2812 true Chr4: 12932562-12935373 Arabidopsis thaliana
AT4G25250 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12932562-12934561 Arabidopsis thaliana
AT4G25250 2.0kb downstream 2.0kb downstream 2812 true Chr4: 12934562-12937373 Arabidopsis thaliana
AT4G25250 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12935374-12937373 Arabidopsis thaliana
AT4G25250 5.0kb upstream 5.0kb upstream 5812 true Chr4: 12929562-12935373 Arabidopsis thaliana
AT4G25250 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12929562-12934561 Arabidopsis thaliana
AT4G25250 5.0kb downstream 5.0kb downstream 5812 true Chr4: 12934562-12940373 Arabidopsis thaliana
AT4G25250 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12935374-12940373 Arabidopsis thaliana
AT4G25250 10.0kb upstream 10.0kb upstream 10812 true Chr4: 12924562-12935373 Arabidopsis thaliana
AT4G25250 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12924562-12934561 Arabidopsis thaliana
AT4G25250 10.0kb downstream 10.0kb downstream 10812 true Chr4: 12934562-12945373 Arabidopsis thaliana
AT4G25250 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12935374-12945373 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362171 5261 Brassicaceae View MSA
123837730 5264 Brassicales-Malvales View MSA
124338445 5266 SBM View MSA
124251328 5268 Malvidae View MSA
124069066 5270 Rosid View MSA
123751304 5271 Pentapetalae View MSA
122797599 5272 Eudicot View MSA
122046899 5273 Angiosperm View MSA
121310670 5274 Embryophyte View MSA
123348096 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.825       Low
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 3.131        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 6.392        

0 Strain