Gene : AT4G25010 A. thaliana TAIR10
Defline:  (1 of 4) PTHR10791//PTHR10791:SF65 - RAG1-ACTIVATING PROTEIN 1 // BIDIRECTIONAL SUGAR TRANSPORTER SWEET11-RELATED Genomic Order:  2493
Name:  ? AT4G25010 Secondary Identifier:  ? PAC:19648992
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25010 0.5kb upstream 0.5kb upstream 2657 true Chr4: 12854385-12857041 Arabidopsis thaliana
AT4G25010 0.5kb upstream 0.5kb upstream 500 false Chr4: 12856542-12857041 Arabidopsis thaliana
AT4G25010 0.5kb downstream 0.5kb downstream 2657 true Chr4: 12853885-12856541 Arabidopsis thaliana
AT4G25010 0.5kb downstream 0.5kb downstream 500 false Chr4: 12853885-12854384 Arabidopsis thaliana
AT4G25010 1.0kb upstream 1.0kb upstream 3157 true Chr4: 12854385-12857541 Arabidopsis thaliana
AT4G25010 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12856542-12857541 Arabidopsis thaliana
AT4G25010 1.0kb downstream 1.0kb downstream 3157 true Chr4: 12853385-12856541 Arabidopsis thaliana
AT4G25010 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12853385-12854384 Arabidopsis thaliana
AT4G25010 2.0kb upstream 2.0kb upstream 4157 true Chr4: 12854385-12858541 Arabidopsis thaliana
AT4G25010 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12856542-12858541 Arabidopsis thaliana
AT4G25010 2.0kb downstream 2.0kb downstream 4157 true Chr4: 12852385-12856541 Arabidopsis thaliana
AT4G25010 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12852385-12854384 Arabidopsis thaliana
AT4G25010 5.0kb upstream 5.0kb upstream 7157 true Chr4: 12854385-12861541 Arabidopsis thaliana
AT4G25010 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12856542-12861541 Arabidopsis thaliana
AT4G25010 5.0kb downstream 5.0kb downstream 7157 true Chr4: 12849385-12856541 Arabidopsis thaliana
AT4G25010 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12849385-12854384 Arabidopsis thaliana
AT4G25010 10.0kb upstream 10.0kb upstream 12157 true Chr4: 12854385-12866541 Arabidopsis thaliana
AT4G25010 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12856542-12866541 Arabidopsis thaliana
AT4G25010 10.0kb downstream 10.0kb downstream 12157 true Chr4: 12844385-12856541 Arabidopsis thaliana
AT4G25010 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12844385-12854384 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371980 5261 Brassicaceae View MSA
123800273 5264 Brassicales-Malvales View MSA
124297707 5266 SBM View MSA
124149531 5268 Malvidae View MSA
124071404 5270 Rosid View MSA
123751761 5271 Pentapetalae View MSA
122795579 5272 Eudicot View MSA
122043029 5273 Angiosperm View MSA
121310066 5274 Embryophyte View MSA
123428840 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.007     Low Low
cufflinks 0.701        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 4.585       High
cufflinks 0.033     Low  
cufflinks 0.565        

0 Strain