Gene : CHLM A. thaliana TAIR10
Primary Identifier:  ? AT4G25080 Defline:  (1 of 1) 2.1.1.11 - Magnesium protoporphyrin IX methyltransferase / S-adenosylmethioninemagnesium protoporphyrin methyltransferase
Genomic Order:  2499 Name:  ? AT4G25080
Secondary Identifier:  ? PAC:19648913
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana CHLOROPHYLL-SYN Arabidopsis thaliana pathologic  

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G25080 0.5kb upstream 0.5kb upstream 2306 true Chr4: 12876346-12878651 Arabidopsis thaliana
AT4G25080 0.5kb upstream 0.5kb upstream 500 false Chr4: 12876346-12876845 Arabidopsis thaliana
AT4G25080 0.5kb downstream 0.5kb downstream 2306 true Chr4: 12876846-12879151 Arabidopsis thaliana
AT4G25080 0.5kb downstream 0.5kb downstream 500 false Chr4: 12878652-12879151 Arabidopsis thaliana
AT4G25080 1.0kb upstream 1.0kb upstream 2806 true Chr4: 12875846-12878651 Arabidopsis thaliana
AT4G25080 1.0kb upstream 1.0kb upstream 1000 false Chr4: 12875846-12876845 Arabidopsis thaliana
AT4G25080 1.0kb downstream 1.0kb downstream 2806 true Chr4: 12876846-12879651 Arabidopsis thaliana
AT4G25080 1.0kb downstream 1.0kb downstream 1000 false Chr4: 12878652-12879651 Arabidopsis thaliana
AT4G25080 2.0kb upstream 2.0kb upstream 3806 true Chr4: 12874846-12878651 Arabidopsis thaliana
AT4G25080 2.0kb upstream 2.0kb upstream 2000 false Chr4: 12874846-12876845 Arabidopsis thaliana
AT4G25080 2.0kb downstream 2.0kb downstream 3806 true Chr4: 12876846-12880651 Arabidopsis thaliana
AT4G25080 2.0kb downstream 2.0kb downstream 2000 false Chr4: 12878652-12880651 Arabidopsis thaliana
AT4G25080 5.0kb upstream 5.0kb upstream 6806 true Chr4: 12871846-12878651 Arabidopsis thaliana
AT4G25080 5.0kb upstream 5.0kb upstream 5000 false Chr4: 12871846-12876845 Arabidopsis thaliana
AT4G25080 5.0kb downstream 5.0kb downstream 6806 true Chr4: 12876846-12883651 Arabidopsis thaliana
AT4G25080 5.0kb downstream 5.0kb downstream 5000 false Chr4: 12878652-12883651 Arabidopsis thaliana
AT4G25080 10.0kb upstream 10.0kb upstream 11806 true Chr4: 12866846-12878651 Arabidopsis thaliana
AT4G25080 10.0kb upstream 10.0kb upstream 10000 false Chr4: 12866846-12876845 Arabidopsis thaliana
AT4G25080 10.0kb downstream 10.0kb downstream 11806 true Chr4: 12876846-12888651 Arabidopsis thaliana
AT4G25080 10.0kb downstream 10.0kb downstream 10000 false Chr4: 12878652-12888651 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377019 5261 Brassicaceae View MSA
123828001 5264 Brassicales-Malvales View MSA
124344957 5266 SBM View MSA
124250095 5268 Malvidae View MSA
124063619 5270 Rosid View MSA
123739209 5271 Pentapetalae View MSA
122792870 5272 Eudicot View MSA
122043100 5273 Angiosperm View MSA
121345477 5274 Embryophyte View MSA
123424951 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 31.992     High  
cufflinks 3.464        
cufflinks 34.27     High  
cufflinks 3.045        
cufflinks 29.41     High  
cufflinks 2.186       Low

0 Strain