Gene : AT4G28210 A. thaliana TAIR10
Defline:  embryo defective 1923 Genomic Order:  2841
Name:  ? AT4G28210 Secondary Identifier:  ? PAC:19646829
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28210 0.5kb upstream 0.5kb upstream 1962 true Chr4: 13990117-13992078 Arabidopsis thaliana
AT4G28210 0.5kb upstream 0.5kb upstream 500 false Chr4: 13990117-13990616 Arabidopsis thaliana
AT4G28210 0.5kb downstream 0.5kb downstream 1962 true Chr4: 13990617-13992578 Arabidopsis thaliana
AT4G28210 0.5kb downstream 0.5kb downstream 500 false Chr4: 13992079-13992578 Arabidopsis thaliana
AT4G28210 1.0kb upstream 1.0kb upstream 2462 true Chr4: 13989617-13992078 Arabidopsis thaliana
AT4G28210 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13989617-13990616 Arabidopsis thaliana
AT4G28210 1.0kb downstream 1.0kb downstream 2462 true Chr4: 13990617-13993078 Arabidopsis thaliana
AT4G28210 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13992079-13993078 Arabidopsis thaliana
AT4G28210 2.0kb upstream 2.0kb upstream 3462 true Chr4: 13988617-13992078 Arabidopsis thaliana
AT4G28210 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13988617-13990616 Arabidopsis thaliana
AT4G28210 2.0kb downstream 2.0kb downstream 3462 true Chr4: 13990617-13994078 Arabidopsis thaliana
AT4G28210 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13992079-13994078 Arabidopsis thaliana
AT4G28210 5.0kb upstream 5.0kb upstream 6462 true Chr4: 13985617-13992078 Arabidopsis thaliana
AT4G28210 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13985617-13990616 Arabidopsis thaliana
AT4G28210 5.0kb downstream 5.0kb downstream 6462 true Chr4: 13990617-13997078 Arabidopsis thaliana
AT4G28210 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13992079-13997078 Arabidopsis thaliana
AT4G28210 10.0kb upstream 10.0kb upstream 11462 true Chr4: 13980617-13992078 Arabidopsis thaliana
AT4G28210 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13980617-13990616 Arabidopsis thaliana
AT4G28210 10.0kb downstream 10.0kb downstream 11462 true Chr4: 13990617-14002078 Arabidopsis thaliana
AT4G28210 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13992079-14002078 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362245 5261 Brassicaceae View MSA
123829953 5264 Brassicales-Malvales View MSA
124340628 5266 SBM View MSA
124238061 5268 Malvidae View MSA
124061138 5270 Rosid View MSA
123738834 5271 Pentapetalae View MSA
122792895 5272 Eudicot View MSA
122049851 5273 Angiosperm View MSA
121345117 5274 Embryophyte View MSA
123380161 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.052       High
cufflinks 5.534        
cufflinks 15.597       High
cufflinks 4.748       Low
cufflinks 11.901        
cufflinks 5.102        

0 Strain