Gene : AT4G28260 A. thaliana TAIR10
Defline:  (1 of 9) PF12874 - Zinc-finger of C2H2 type (zf-met) Genomic Order:  2846
Name:  ? AT4G28260 Secondary Identifier:  ? PAC:19647029
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28260 0.5kb upstream 0.5kb upstream 2986 true Chr4: 14003985-14006970 Arabidopsis thaliana
AT4G28260 0.5kb upstream 0.5kb upstream 500 false Chr4: 14003985-14004484 Arabidopsis thaliana
AT4G28260 0.5kb downstream 0.5kb downstream 2986 true Chr4: 14004485-14007470 Arabidopsis thaliana
AT4G28260 0.5kb downstream 0.5kb downstream 500 false Chr4: 14006971-14007470 Arabidopsis thaliana
AT4G28260 1.0kb upstream 1.0kb upstream 3486 true Chr4: 14003485-14006970 Arabidopsis thaliana
AT4G28260 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14003485-14004484 Arabidopsis thaliana
AT4G28260 1.0kb downstream 1.0kb downstream 3486 true Chr4: 14004485-14007970 Arabidopsis thaliana
AT4G28260 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14006971-14007970 Arabidopsis thaliana
AT4G28260 2.0kb upstream 2.0kb upstream 4486 true Chr4: 14002485-14006970 Arabidopsis thaliana
AT4G28260 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14002485-14004484 Arabidopsis thaliana
AT4G28260 2.0kb downstream 2.0kb downstream 4486 true Chr4: 14004485-14008970 Arabidopsis thaliana
AT4G28260 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14006971-14008970 Arabidopsis thaliana
AT4G28260 5.0kb upstream 5.0kb upstream 7486 true Chr4: 13999485-14006970 Arabidopsis thaliana
AT4G28260 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13999485-14004484 Arabidopsis thaliana
AT4G28260 5.0kb downstream 5.0kb downstream 7486 true Chr4: 14004485-14011970 Arabidopsis thaliana
AT4G28260 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14006971-14011970 Arabidopsis thaliana
AT4G28260 10.0kb upstream 10.0kb upstream 12486 true Chr4: 13994485-14006970 Arabidopsis thaliana
AT4G28260 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13994485-14004484 Arabidopsis thaliana
AT4G28260 10.0kb downstream 10.0kb downstream 12486 true Chr4: 14004485-14016970 Arabidopsis thaliana
AT4G28260 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14006971-14016970 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368830 5261 Brassicaceae View MSA
123830335 5264 Brassicales-Malvales View MSA
124350095 5266 SBM View MSA
124240820 5268 Malvidae View MSA
124065492 5270 Rosid View MSA
123738708 5271 Pentapetalae View MSA
122786250 5272 Eudicot View MSA
122046877 5273 Angiosperm View MSA
121344318 5274 Embryophyte View MSA
123380022 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 18.008        
cufflinks 21.422        
cufflinks 17.422        
cufflinks 22.404       High
cufflinks 19.447        
cufflinks 15.967       Low

0 Strain