Gene : AT4G27680 A. thaliana TAIR10
Defline:  (1 of 2) PTHR23074//PTHR23074:SF20 - AAA ATPASE // GH08677P Genomic Order:  2783
Name:  ? AT4G27680 Secondary Identifier:  ? PAC:19648360
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27680 0.5kb upstream 0.5kb upstream 2737 true Chr4: 13820606-13823342 Arabidopsis thaliana
AT4G27680 0.5kb upstream 0.5kb upstream 500 false Chr4: 13820606-13821105 Arabidopsis thaliana
AT4G27680 0.5kb downstream 0.5kb downstream 2737 true Chr4: 13821106-13823842 Arabidopsis thaliana
AT4G27680 0.5kb downstream 0.5kb downstream 500 false Chr4: 13823343-13823842 Arabidopsis thaliana
AT4G27680 1.0kb upstream 1.0kb upstream 3237 true Chr4: 13820106-13823342 Arabidopsis thaliana
AT4G27680 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13820106-13821105 Arabidopsis thaliana
AT4G27680 1.0kb downstream 1.0kb downstream 3237 true Chr4: 13821106-13824342 Arabidopsis thaliana
AT4G27680 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13823343-13824342 Arabidopsis thaliana
AT4G27680 2.0kb upstream 2.0kb upstream 4237 true Chr4: 13819106-13823342 Arabidopsis thaliana
AT4G27680 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13819106-13821105 Arabidopsis thaliana
AT4G27680 2.0kb downstream 2.0kb downstream 4237 true Chr4: 13821106-13825342 Arabidopsis thaliana
AT4G27680 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13823343-13825342 Arabidopsis thaliana
AT4G27680 5.0kb upstream 5.0kb upstream 7237 true Chr4: 13816106-13823342 Arabidopsis thaliana
AT4G27680 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13816106-13821105 Arabidopsis thaliana
AT4G27680 5.0kb downstream 5.0kb downstream 7237 true Chr4: 13821106-13828342 Arabidopsis thaliana
AT4G27680 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13823343-13828342 Arabidopsis thaliana
AT4G27680 10.0kb upstream 10.0kb upstream 12237 true Chr4: 13811106-13823342 Arabidopsis thaliana
AT4G27680 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13811106-13821105 Arabidopsis thaliana
AT4G27680 10.0kb downstream 10.0kb downstream 12237 true Chr4: 13821106-13833342 Arabidopsis thaliana
AT4G27680 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13823343-13833342 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381054 5261 Brassicaceae View MSA
123838040 5264 Brassicales-Malvales View MSA
124350869 5266 SBM View MSA
124242662 5268 Malvidae View MSA
124050374 5270 Rosid View MSA
123742259 5271 Pentapetalae View MSA
122791564 5272 Eudicot View MSA
122051596 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121350518 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.581        
cufflinks 8.843        
cufflinks 9.583        
cufflinks 10.255        
cufflinks 11.476       High
cufflinks 8.276       Low

0 Strain