Gene : AT4G27570 A. thaliana TAIR10
Defline:  (1 of 11) 2.4.2.51 - Anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase Genomic Order:  2767
Name:  ? AT4G27570 Secondary Identifier:  ? PAC:19648975
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-7678 Arabidopsis thaliana pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27570 0.5kb upstream 0.5kb upstream 2101 true Chr4: 13763464-13765564 Arabidopsis thaliana
AT4G27570 0.5kb upstream 0.5kb upstream 500 false Chr4: 13765065-13765564 Arabidopsis thaliana
AT4G27570 0.5kb downstream 0.5kb downstream 2101 true Chr4: 13762964-13765064 Arabidopsis thaliana
AT4G27570 0.5kb downstream 0.5kb downstream 500 false Chr4: 13762964-13763463 Arabidopsis thaliana
AT4G27570 1.0kb upstream 1.0kb upstream 2601 true Chr4: 13763464-13766064 Arabidopsis thaliana
AT4G27570 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13765065-13766064 Arabidopsis thaliana
AT4G27570 1.0kb downstream 1.0kb downstream 2601 true Chr4: 13762464-13765064 Arabidopsis thaliana
AT4G27570 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13762464-13763463 Arabidopsis thaliana
AT4G27570 2.0kb upstream 2.0kb upstream 3601 true Chr4: 13763464-13767064 Arabidopsis thaliana
AT4G27570 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13765065-13767064 Arabidopsis thaliana
AT4G27570 2.0kb downstream 2.0kb downstream 3601 true Chr4: 13761464-13765064 Arabidopsis thaliana
AT4G27570 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13761464-13763463 Arabidopsis thaliana
AT4G27570 5.0kb upstream 5.0kb upstream 6601 true Chr4: 13763464-13770064 Arabidopsis thaliana
AT4G27570 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13765065-13770064 Arabidopsis thaliana
AT4G27570 5.0kb downstream 5.0kb downstream 6601 true Chr4: 13758464-13765064 Arabidopsis thaliana
AT4G27570 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13758464-13763463 Arabidopsis thaliana
AT4G27570 10.0kb upstream 10.0kb upstream 11601 true Chr4: 13763464-13775064 Arabidopsis thaliana
AT4G27570 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13765065-13775064 Arabidopsis thaliana
AT4G27570 10.0kb downstream 10.0kb downstream 11601 true Chr4: 13753464-13765064 Arabidopsis thaliana
AT4G27570 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13753464-13763463 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377601 5261 Brassicaceae View MSA
123801576 5264 Brassicales-Malvales View MSA
124346901 5266 SBM View MSA
124241012 5268 Malvidae View MSA
124064648 5270 Rosid View MSA
123753607 5271 Pentapetalae View MSA
122797779 5272 Eudicot View MSA
122051696 5273 Angiosperm View MSA
121351097 5274 Embryophyte View MSA
123428681 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.209     Low High
cufflinks 0.019     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.019     Low  
cufflinks 0.03     Low  
cufflinks 0.02     Low  

0 Strain