Gene : AT4G27435 A. thaliana TAIR10
Defline:  (1 of 15) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  2753
Name:  ? AT4G27435 Secondary Identifier:  ? PAC:19648699
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27435 0.5kb upstream 0.5kb upstream 1844 true Chr4: 13723294-13725137 Arabidopsis thaliana
AT4G27435 0.5kb upstream 0.5kb upstream 500 false Chr4: 13723294-13723793 Arabidopsis thaliana
AT4G27435 0.5kb downstream 0.5kb downstream 1844 true Chr4: 13723794-13725637 Arabidopsis thaliana
AT4G27435 0.5kb downstream 0.5kb downstream 500 false Chr4: 13725138-13725637 Arabidopsis thaliana
AT4G27435 1.0kb upstream 1.0kb upstream 2344 true Chr4: 13722794-13725137 Arabidopsis thaliana
AT4G27435 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13722794-13723793 Arabidopsis thaliana
AT4G27435 1.0kb downstream 1.0kb downstream 2344 true Chr4: 13723794-13726137 Arabidopsis thaliana
AT4G27435 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13725138-13726137 Arabidopsis thaliana
AT4G27435 2.0kb upstream 2.0kb upstream 3344 true Chr4: 13721794-13725137 Arabidopsis thaliana
AT4G27435 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13721794-13723793 Arabidopsis thaliana
AT4G27435 2.0kb downstream 2.0kb downstream 3344 true Chr4: 13723794-13727137 Arabidopsis thaliana
AT4G27435 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13725138-13727137 Arabidopsis thaliana
AT4G27435 5.0kb upstream 5.0kb upstream 6344 true Chr4: 13718794-13725137 Arabidopsis thaliana
AT4G27435 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13718794-13723793 Arabidopsis thaliana
AT4G27435 5.0kb downstream 5.0kb downstream 6344 true Chr4: 13723794-13730137 Arabidopsis thaliana
AT4G27435 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13725138-13730137 Arabidopsis thaliana
AT4G27435 10.0kb upstream 10.0kb upstream 11344 true Chr4: 13713794-13725137 Arabidopsis thaliana
AT4G27435 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13713794-13723793 Arabidopsis thaliana
AT4G27435 10.0kb downstream 10.0kb downstream 11344 true Chr4: 13723794-13735137 Arabidopsis thaliana
AT4G27435 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13725138-13735137 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041273 5273 Angiosperm View MSA
122369975 5261 Brassicaceae View MSA
123830044 5264 Brassicales-Malvales View MSA
124337283 5266 SBM View MSA
124250780 5268 Malvidae View MSA
124066050 5270 Rosid View MSA
123742828 5271 Pentapetalae View MSA
122791764 5272 Eudicot View MSA
121349405 5274 Embryophyte View MSA
123381298 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.19        
cufflinks 8.997        
cufflinks 2.668        
cufflinks 14.093       High
cufflinks 2.596        
cufflinks 15.589       High

0 Strain