Gene : AT4G27490 A. thaliana TAIR10
Defline:  (1 of 1) K12587 - exosome complex component MTR3 (MTR3, EXOSC6) Genomic Order:  2759
Name:  ? AT4G27490 Secondary Identifier:  ? PAC:19648610
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27490 0.5kb upstream 0.5kb upstream 2498 true Chr4: 13739306-13741803 Arabidopsis thaliana
AT4G27490 0.5kb upstream 0.5kb upstream 500 false Chr4: 13739306-13739805 Arabidopsis thaliana
AT4G27490 0.5kb downstream 0.5kb downstream 2498 true Chr4: 13739806-13742303 Arabidopsis thaliana
AT4G27490 0.5kb downstream 0.5kb downstream 500 false Chr4: 13741804-13742303 Arabidopsis thaliana
AT4G27490 1.0kb upstream 1.0kb upstream 2998 true Chr4: 13738806-13741803 Arabidopsis thaliana
AT4G27490 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13738806-13739805 Arabidopsis thaliana
AT4G27490 1.0kb downstream 1.0kb downstream 2998 true Chr4: 13739806-13742803 Arabidopsis thaliana
AT4G27490 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13741804-13742803 Arabidopsis thaliana
AT4G27490 2.0kb upstream 2.0kb upstream 3998 true Chr4: 13737806-13741803 Arabidopsis thaliana
AT4G27490 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13737806-13739805 Arabidopsis thaliana
AT4G27490 2.0kb downstream 2.0kb downstream 3998 true Chr4: 13739806-13743803 Arabidopsis thaliana
AT4G27490 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13741804-13743803 Arabidopsis thaliana
AT4G27490 5.0kb upstream 5.0kb upstream 6998 true Chr4: 13734806-13741803 Arabidopsis thaliana
AT4G27490 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13734806-13739805 Arabidopsis thaliana
AT4G27490 5.0kb downstream 5.0kb downstream 6998 true Chr4: 13739806-13746803 Arabidopsis thaliana
AT4G27490 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13741804-13746803 Arabidopsis thaliana
AT4G27490 10.0kb upstream 10.0kb upstream 11998 true Chr4: 13729806-13741803 Arabidopsis thaliana
AT4G27490 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13729806-13739805 Arabidopsis thaliana
AT4G27490 10.0kb downstream 10.0kb downstream 11998 true Chr4: 13739806-13751803 Arabidopsis thaliana
AT4G27490 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13741804-13751803 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365051 5261 Brassicaceae View MSA
123829591 5264 Brassicales-Malvales View MSA
124337850 5266 SBM View MSA
124240916 5268 Malvidae View MSA
124068293 5270 Rosid View MSA
123753440 5271 Pentapetalae View MSA
122790038 5272 Eudicot View MSA
122043786 5273 Angiosperm View MSA
121347270 5274 Embryophyte View MSA
123423845 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.909        
cufflinks 10.417        
cufflinks 3.842        
cufflinks 9.205        
cufflinks 2.985       Low
cufflinks 11.424       High

0 Strain