Gene : AT4G27460 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13780:SF39 - CBS DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  2756
Name:  ? AT4G27460 Secondary Identifier:  ? PAC:19645217
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27460 0.5kb upstream 0.5kb upstream 1895 true Chr4: 13732410-13734304 Arabidopsis thaliana
AT4G27460 0.5kb upstream 0.5kb upstream 500 false Chr4: 13732410-13732909 Arabidopsis thaliana
AT4G27460 0.5kb downstream 0.5kb downstream 1895 true Chr4: 13732910-13734804 Arabidopsis thaliana
AT4G27460 0.5kb downstream 0.5kb downstream 500 false Chr4: 13734305-13734804 Arabidopsis thaliana
AT4G27460 1.0kb upstream 1.0kb upstream 2395 true Chr4: 13731910-13734304 Arabidopsis thaliana
AT4G27460 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13731910-13732909 Arabidopsis thaliana
AT4G27460 1.0kb downstream 1.0kb downstream 2395 true Chr4: 13732910-13735304 Arabidopsis thaliana
AT4G27460 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13734305-13735304 Arabidopsis thaliana
AT4G27460 2.0kb upstream 2.0kb upstream 3395 true Chr4: 13730910-13734304 Arabidopsis thaliana
AT4G27460 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13730910-13732909 Arabidopsis thaliana
AT4G27460 2.0kb downstream 2.0kb downstream 3395 true Chr4: 13732910-13736304 Arabidopsis thaliana
AT4G27460 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13734305-13736304 Arabidopsis thaliana
AT4G27460 5.0kb upstream 5.0kb upstream 6395 true Chr4: 13727910-13734304 Arabidopsis thaliana
AT4G27460 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13727910-13732909 Arabidopsis thaliana
AT4G27460 5.0kb downstream 5.0kb downstream 6395 true Chr4: 13732910-13739304 Arabidopsis thaliana
AT4G27460 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13734305-13739304 Arabidopsis thaliana
AT4G27460 10.0kb upstream 10.0kb upstream 11395 true Chr4: 13722910-13734304 Arabidopsis thaliana
AT4G27460 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13722910-13732909 Arabidopsis thaliana
AT4G27460 10.0kb downstream 10.0kb downstream 11395 true Chr4: 13732910-13744304 Arabidopsis thaliana
AT4G27460 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13734305-13744304 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371955 5261 Brassicaceae View MSA
123837926 5264 Brassicales-Malvales View MSA
124340536 5266 SBM View MSA
124245935 5268 Malvidae View MSA
124069428 5270 Rosid View MSA
123752879 5271 Pentapetalae View MSA
122796215 5272 Eudicot View MSA
122042331 5273 Angiosperm View MSA
121351611 5274 Embryophyte View MSA
123382245 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.315       Low
cufflinks 2.618        
cufflinks 3.625        
cufflinks 8.32        
cufflinks 16.618       High
cufflinks 3.77        

0 Strain