Gene : HTA2 A. thaliana TAIR10
Primary Identifier:  ? AT4G27230 Defline:  (1 of 13) K11251 - histone H2A (H2A)
Genomic Order:  2731 Name:  ? AT4G27230
Secondary Identifier:  ? PAC:19644958
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27230 0.5kb upstream 0.5kb upstream 1662 true Chr4: 13637288-13638949 Arabidopsis thaliana
AT4G27230 0.5kb upstream 0.5kb upstream 500 false Chr4: 13638450-13638949 Arabidopsis thaliana
AT4G27230 0.5kb downstream 0.5kb downstream 1662 true Chr4: 13636788-13638449 Arabidopsis thaliana
AT4G27230 0.5kb downstream 0.5kb downstream 500 false Chr4: 13636788-13637287 Arabidopsis thaliana
AT4G27230 1.0kb upstream 1.0kb upstream 2162 true Chr4: 13637288-13639449 Arabidopsis thaliana
AT4G27230 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13638450-13639449 Arabidopsis thaliana
AT4G27230 1.0kb downstream 1.0kb downstream 2162 true Chr4: 13636288-13638449 Arabidopsis thaliana
AT4G27230 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13636288-13637287 Arabidopsis thaliana
AT4G27230 2.0kb upstream 2.0kb upstream 3162 true Chr4: 13637288-13640449 Arabidopsis thaliana
AT4G27230 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13638450-13640449 Arabidopsis thaliana
AT4G27230 2.0kb downstream 2.0kb downstream 3162 true Chr4: 13635288-13638449 Arabidopsis thaliana
AT4G27230 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13635288-13637287 Arabidopsis thaliana
AT4G27230 5.0kb upstream 5.0kb upstream 6162 true Chr4: 13637288-13643449 Arabidopsis thaliana
AT4G27230 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13638450-13643449 Arabidopsis thaliana
AT4G27230 5.0kb downstream 5.0kb downstream 6162 true Chr4: 13632288-13638449 Arabidopsis thaliana
AT4G27230 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13632288-13637287 Arabidopsis thaliana
AT4G27230 10.0kb upstream 10.0kb upstream 11162 true Chr4: 13637288-13648449 Arabidopsis thaliana
AT4G27230 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13638450-13648449 Arabidopsis thaliana
AT4G27230 10.0kb downstream 10.0kb downstream 11162 true Chr4: 13627288-13638449 Arabidopsis thaliana
AT4G27230 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13627288-13637287 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379636 5261 Brassicaceae View MSA
123840561 5264 Brassicales-Malvales View MSA
124337241 5266 SBM View MSA
124240276 5268 Malvidae View MSA
124063341 5270 Rosid View MSA
123745696 5271 Pentapetalae View MSA
122790342 5272 Eudicot View MSA
122050010 5273 Angiosperm View MSA
121343825 5274 Embryophyte View MSA
123427518 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.978        
cufflinks 10.509        
cufflinks 8.264        
cufflinks 12.012        
cufflinks 6.241       Low
cufflinks 14.711       High

0 Strain