Gene : TOR1 A. thaliana TAIR10
Primary Identifier:  ? AT4G27060 Defline:  (1 of 2) PTHR31355//PTHR31355:SF7 - FAMILY NOT NAMED // MICROTUBULE-ASSOCIATED PROTEIN SPIRAL2-LIKE-RELATED
Genomic Order:  2716 Name:  ? AT4G27060
Secondary Identifier:  ? PAC:19646043
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27060 0.5kb upstream 0.5kb upstream 4255 true Chr4: 13581401-13585655 Arabidopsis thaliana
AT4G27060 0.5kb upstream 0.5kb upstream 500 false Chr4: 13585156-13585655 Arabidopsis thaliana
AT4G27060 0.5kb downstream 0.5kb downstream 4255 true Chr4: 13580901-13585155 Arabidopsis thaliana
AT4G27060 0.5kb downstream 0.5kb downstream 500 false Chr4: 13580901-13581400 Arabidopsis thaliana
AT4G27060 1.0kb upstream 1.0kb upstream 4755 true Chr4: 13581401-13586155 Arabidopsis thaliana
AT4G27060 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13585156-13586155 Arabidopsis thaliana
AT4G27060 1.0kb downstream 1.0kb downstream 4755 true Chr4: 13580401-13585155 Arabidopsis thaliana
AT4G27060 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13580401-13581400 Arabidopsis thaliana
AT4G27060 2.0kb upstream 2.0kb upstream 5755 true Chr4: 13581401-13587155 Arabidopsis thaliana
AT4G27060 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13585156-13587155 Arabidopsis thaliana
AT4G27060 2.0kb downstream 2.0kb downstream 5755 true Chr4: 13579401-13585155 Arabidopsis thaliana
AT4G27060 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13579401-13581400 Arabidopsis thaliana
AT4G27060 5.0kb upstream 5.0kb upstream 8755 true Chr4: 13581401-13590155 Arabidopsis thaliana
AT4G27060 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13585156-13590155 Arabidopsis thaliana
AT4G27060 5.0kb downstream 5.0kb downstream 8755 true Chr4: 13576401-13585155 Arabidopsis thaliana
AT4G27060 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13576401-13581400 Arabidopsis thaliana
AT4G27060 10.0kb upstream 10.0kb upstream 13755 true Chr4: 13581401-13595155 Arabidopsis thaliana
AT4G27060 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13585156-13595155 Arabidopsis thaliana
AT4G27060 10.0kb downstream 10.0kb downstream 13755 true Chr4: 13571401-13585155 Arabidopsis thaliana
AT4G27060 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13571401-13581400 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361186 5261 Brassicaceae View MSA
123828311 5264 Brassicales-Malvales View MSA
124351560 5266 SBM View MSA
124239669 5268 Malvidae View MSA
124068747 5270 Rosid View MSA
123740054 5271 Pentapetalae View MSA
122795773 5272 Eudicot View MSA
122043238 5273 Angiosperm View MSA
121344620 5274 Embryophyte View MSA
123426800 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.08        
cufflinks 16.786        
cufflinks 7.899        
cufflinks 17.646        
cufflinks 8.709        
cufflinks 19.455       High

0 Strain