Gene : PDIL5-4 A. thaliana TAIR10
Primary Identifier:  ? AT4G27080 Defline:  (1 of 3) PTHR10984//PTHR10984:SF37 - ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN // CELL REDOX HOMEOSTASIS PROTEIN-RELATED
Genomic Order:  2718 Name:  ? AT4G27080
Secondary Identifier:  ? PAC:19648471
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

4 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27080 0.5kb upstream 0.5kb upstream 5014 true Chr4: 13588572-13593585 Arabidopsis thaliana
AT4G27080 0.5kb upstream 0.5kb upstream 500 false Chr4: 13588572-13589071 Arabidopsis thaliana
AT4G27080 0.5kb downstream 0.5kb downstream 5014 true Chr4: 13589072-13594085 Arabidopsis thaliana
AT4G27080 0.5kb downstream 0.5kb downstream 500 false Chr4: 13593586-13594085 Arabidopsis thaliana
AT4G27080 1.0kb upstream 1.0kb upstream 5514 true Chr4: 13588072-13593585 Arabidopsis thaliana
AT4G27080 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13588072-13589071 Arabidopsis thaliana
AT4G27080 1.0kb downstream 1.0kb downstream 5514 true Chr4: 13589072-13594585 Arabidopsis thaliana
AT4G27080 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13593586-13594585 Arabidopsis thaliana
AT4G27080 2.0kb upstream 2.0kb upstream 6514 true Chr4: 13587072-13593585 Arabidopsis thaliana
AT4G27080 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13587072-13589071 Arabidopsis thaliana
AT4G27080 2.0kb downstream 2.0kb downstream 6514 true Chr4: 13589072-13595585 Arabidopsis thaliana
AT4G27080 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13593586-13595585 Arabidopsis thaliana
AT4G27080 5.0kb upstream 5.0kb upstream 9514 true Chr4: 13584072-13593585 Arabidopsis thaliana
AT4G27080 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13584072-13589071 Arabidopsis thaliana
AT4G27080 5.0kb downstream 5.0kb downstream 9514 true Chr4: 13589072-13598585 Arabidopsis thaliana
AT4G27080 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13593586-13598585 Arabidopsis thaliana
AT4G27080 10.0kb upstream 10.0kb upstream 14514 true Chr4: 13579072-13593585 Arabidopsis thaliana
AT4G27080 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13579072-13589071 Arabidopsis thaliana
AT4G27080 10.0kb downstream 10.0kb downstream 14514 true Chr4: 13589072-13603585 Arabidopsis thaliana
AT4G27080 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13593586-13603585 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122791101 5272 Eudicot View MSA
122362246 5261 Brassicaceae View MSA
123798335 5264 Brassicales-Malvales View MSA
124295988 5266 SBM View MSA
124252987 5268 Malvidae View MSA
124071140 5270 Rosid View MSA
123739354 5271 Pentapetalae View MSA
122046735 5273 Angiosperm View MSA
121350874 5274 Embryophyte View MSA
123426017 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.947        
cufflinks 3.551        
cufflinks 3.684        
cufflinks 3.786        
cufflinks 3.172       Low
cufflinks 4.36       High

0 Strain