Gene : AT4G27100 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22957//PTHR22957:SF276 - TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN // SUBFAMILY NOT NAMED Genomic Order:  2720
Name:  ? AT4G27100 Secondary Identifier:  ? PAC:19645598
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27100 0.5kb upstream 0.5kb upstream 3855 true Chr4: 13595061-13598915 Arabidopsis thaliana
AT4G27100 0.5kb upstream 0.5kb upstream 500 false Chr4: 13595061-13595560 Arabidopsis thaliana
AT4G27100 0.5kb downstream 0.5kb downstream 3855 true Chr4: 13595561-13599415 Arabidopsis thaliana
AT4G27100 0.5kb downstream 0.5kb downstream 500 false Chr4: 13598916-13599415 Arabidopsis thaliana
AT4G27100 1.0kb upstream 1.0kb upstream 4355 true Chr4: 13594561-13598915 Arabidopsis thaliana
AT4G27100 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13594561-13595560 Arabidopsis thaliana
AT4G27100 1.0kb downstream 1.0kb downstream 4355 true Chr4: 13595561-13599915 Arabidopsis thaliana
AT4G27100 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13598916-13599915 Arabidopsis thaliana
AT4G27100 2.0kb upstream 2.0kb upstream 5355 true Chr4: 13593561-13598915 Arabidopsis thaliana
AT4G27100 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13593561-13595560 Arabidopsis thaliana
AT4G27100 2.0kb downstream 2.0kb downstream 5355 true Chr4: 13595561-13600915 Arabidopsis thaliana
AT4G27100 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13598916-13600915 Arabidopsis thaliana
AT4G27100 5.0kb upstream 5.0kb upstream 8355 true Chr4: 13590561-13598915 Arabidopsis thaliana
AT4G27100 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13590561-13595560 Arabidopsis thaliana
AT4G27100 5.0kb downstream 5.0kb downstream 8355 true Chr4: 13595561-13603915 Arabidopsis thaliana
AT4G27100 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13598916-13603915 Arabidopsis thaliana
AT4G27100 10.0kb upstream 10.0kb upstream 13355 true Chr4: 13585561-13598915 Arabidopsis thaliana
AT4G27100 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13585561-13595560 Arabidopsis thaliana
AT4G27100 10.0kb downstream 10.0kb downstream 13355 true Chr4: 13595561-13608915 Arabidopsis thaliana
AT4G27100 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13598916-13608915 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363559 5261 Brassicaceae View MSA
123838028 5264 Brassicales-Malvales View MSA
124342242 5266 SBM View MSA
124253987 5268 Malvidae View MSA
124064798 5270 Rosid View MSA
123749746 5271 Pentapetalae View MSA
122789971 5272 Eudicot View MSA
122046428 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.204       High
cufflinks 2.738        
cufflinks 2.825        
cufflinks 2.692        
cufflinks 3.42        
cufflinks 3.147        

0 Strain