Gene : ATRBP45C A. thaliana TAIR10
Primary Identifier:  ? AT4G27000 Defline:  (1 of 4) PTHR24012//PTHR24012:SF333 - FAMILY NOT NAMED // POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED
Genomic Order:  2710 Name:  ? AT4G27000
Secondary Identifier:  ? PAC:19645153
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G27000 0.5kb upstream 0.5kb upstream 3751 true Chr4: 13554604-13558354 Arabidopsis thaliana
AT4G27000 0.5kb upstream 0.5kb upstream 500 false Chr4: 13557855-13558354 Arabidopsis thaliana
AT4G27000 0.5kb downstream 0.5kb downstream 3751 true Chr4: 13554104-13557854 Arabidopsis thaliana
AT4G27000 0.5kb downstream 0.5kb downstream 500 false Chr4: 13554104-13554603 Arabidopsis thaliana
AT4G27000 1.0kb upstream 1.0kb upstream 4251 true Chr4: 13554604-13558854 Arabidopsis thaliana
AT4G27000 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13557855-13558854 Arabidopsis thaliana
AT4G27000 1.0kb downstream 1.0kb downstream 4251 true Chr4: 13553604-13557854 Arabidopsis thaliana
AT4G27000 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13553604-13554603 Arabidopsis thaliana
AT4G27000 2.0kb upstream 2.0kb upstream 5251 true Chr4: 13554604-13559854 Arabidopsis thaliana
AT4G27000 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13557855-13559854 Arabidopsis thaliana
AT4G27000 2.0kb downstream 2.0kb downstream 5251 true Chr4: 13552604-13557854 Arabidopsis thaliana
AT4G27000 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13552604-13554603 Arabidopsis thaliana
AT4G27000 5.0kb upstream 5.0kb upstream 8251 true Chr4: 13554604-13562854 Arabidopsis thaliana
AT4G27000 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13557855-13562854 Arabidopsis thaliana
AT4G27000 5.0kb downstream 5.0kb downstream 8251 true Chr4: 13549604-13557854 Arabidopsis thaliana
AT4G27000 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13549604-13554603 Arabidopsis thaliana
AT4G27000 10.0kb upstream 10.0kb upstream 13251 true Chr4: 13554604-13567854 Arabidopsis thaliana
AT4G27000 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13557855-13567854 Arabidopsis thaliana
AT4G27000 10.0kb downstream 10.0kb downstream 13251 true Chr4: 13544604-13557854 Arabidopsis thaliana
AT4G27000 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13544604-13554603 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371262 5261 Brassicaceae View MSA
123841412 5264 Brassicales-Malvales View MSA
124350861 5266 SBM View MSA
124242646 5268 Malvidae View MSA
124066893 5270 Rosid View MSA
123742056 5271 Pentapetalae View MSA
122786744 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 30.907     High Low
cufflinks 82.138     High High
cufflinks 36.138     High  
cufflinks 80.711     High  
cufflinks 35.548     High  
cufflinks 69.423     High  

0 Strain