Gene : AT4G26800 A. thaliana TAIR10
Defline:  (1 of 423) PF13041 - PPR repeat family (PPR_2) Genomic Order:  2689
Name:  ? AT4G26800 Secondary Identifier:  ? PAC:19645243
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G26800 0.5kb upstream 0.5kb upstream 2720 true Chr4: 13489335-13492054 Arabidopsis thaliana
AT4G26800 0.5kb upstream 0.5kb upstream 500 false Chr4: 13489335-13489834 Arabidopsis thaliana
AT4G26800 0.5kb downstream 0.5kb downstream 2720 true Chr4: 13489835-13492554 Arabidopsis thaliana
AT4G26800 0.5kb downstream 0.5kb downstream 500 false Chr4: 13492055-13492554 Arabidopsis thaliana
AT4G26800 1.0kb upstream 1.0kb upstream 3220 true Chr4: 13488835-13492054 Arabidopsis thaliana
AT4G26800 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13488835-13489834 Arabidopsis thaliana
AT4G26800 1.0kb downstream 1.0kb downstream 3220 true Chr4: 13489835-13493054 Arabidopsis thaliana
AT4G26800 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13492055-13493054 Arabidopsis thaliana
AT4G26800 2.0kb upstream 2.0kb upstream 4220 true Chr4: 13487835-13492054 Arabidopsis thaliana
AT4G26800 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13487835-13489834 Arabidopsis thaliana
AT4G26800 2.0kb downstream 2.0kb downstream 4220 true Chr4: 13489835-13494054 Arabidopsis thaliana
AT4G26800 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13492055-13494054 Arabidopsis thaliana
AT4G26800 5.0kb upstream 5.0kb upstream 7220 true Chr4: 13484835-13492054 Arabidopsis thaliana
AT4G26800 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13484835-13489834 Arabidopsis thaliana
AT4G26800 5.0kb downstream 5.0kb downstream 7220 true Chr4: 13489835-13497054 Arabidopsis thaliana
AT4G26800 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13492055-13497054 Arabidopsis thaliana
AT4G26800 10.0kb upstream 10.0kb upstream 12220 true Chr4: 13479835-13492054 Arabidopsis thaliana
AT4G26800 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13479835-13489834 Arabidopsis thaliana
AT4G26800 10.0kb downstream 10.0kb downstream 12220 true Chr4: 13489835-13502054 Arabidopsis thaliana
AT4G26800 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13492055-13502054 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122330488 5261 Brassicaceae Singleton cluster - no MSA
123841847 5264 Brassicales-Malvales View MSA
124351732 5266 SBM View MSA
124254642 5268 Malvidae View MSA
124074430 5270 Rosid View MSA
123753756 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.789        
cufflinks 2.055        
cufflinks 0.465       Low
cufflinks 1.918        
cufflinks 0.478       Low
cufflinks 1.915        

0 Strain