Gene : WRKY20 A. thaliana TAIR10
Primary Identifier:  ? AT4G26640 Defline:  (1 of 1) PTHR31221//PTHR31221:SF21 - FAMILY NOT NAMED // WRKY TRANSCRIPTION FACTOR 20-RELATED
Genomic Order:  2672 Name:  ? AT4G26640
Secondary Identifier:  ? PAC:19646464
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0 Pathways

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G26640 0.5kb upstream 0.5kb upstream 4265 true Chr4: 13437071-13441335 Arabidopsis thaliana
AT4G26640 0.5kb upstream 0.5kb upstream 500 false Chr4: 13440836-13441335 Arabidopsis thaliana
AT4G26640 0.5kb downstream 0.5kb downstream 4265 true Chr4: 13436571-13440835 Arabidopsis thaliana
AT4G26640 0.5kb downstream 0.5kb downstream 500 false Chr4: 13436571-13437070 Arabidopsis thaliana
AT4G26640 1.0kb upstream 1.0kb upstream 4765 true Chr4: 13437071-13441835 Arabidopsis thaliana
AT4G26640 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13440836-13441835 Arabidopsis thaliana
AT4G26640 1.0kb downstream 1.0kb downstream 4765 true Chr4: 13436071-13440835 Arabidopsis thaliana
AT4G26640 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13436071-13437070 Arabidopsis thaliana
AT4G26640 2.0kb upstream 2.0kb upstream 5765 true Chr4: 13437071-13442835 Arabidopsis thaliana
AT4G26640 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13440836-13442835 Arabidopsis thaliana
AT4G26640 2.0kb downstream 2.0kb downstream 5765 true Chr4: 13435071-13440835 Arabidopsis thaliana
AT4G26640 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13435071-13437070 Arabidopsis thaliana
AT4G26640 5.0kb upstream 5.0kb upstream 8765 true Chr4: 13437071-13445835 Arabidopsis thaliana
AT4G26640 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13440836-13445835 Arabidopsis thaliana
AT4G26640 5.0kb downstream 5.0kb downstream 8765 true Chr4: 13432071-13440835 Arabidopsis thaliana
AT4G26640 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13432071-13437070 Arabidopsis thaliana
AT4G26640 10.0kb upstream 10.0kb upstream 13765 true Chr4: 13437071-13450835 Arabidopsis thaliana
AT4G26640 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13440836-13450835 Arabidopsis thaliana
AT4G26640 10.0kb downstream 10.0kb downstream 13765 true Chr4: 13427071-13440835 Arabidopsis thaliana
AT4G26640 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13427071-13437070 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373912 5261 Brassicaceae View MSA
123839122 5264 Brassicales-Malvales View MSA
124339140 5266 SBM View MSA
124240575 5268 Malvidae View MSA
124060791 5270 Rosid View MSA
123750589 5271 Pentapetalae View MSA
122791697 5272 Eudicot View MSA
122046215 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.082        
cufflinks 6.589        
cufflinks 4.917       Low
cufflinks 7.975       High
cufflinks 5.256        
cufflinks 6.665        

0 Strain