Gene : AT4G26680 A. thaliana TAIR10
Defline:  (1 of 18) PF12854//PF13041 - PPR repeat (PPR_1) // PPR repeat family (PPR_2) Genomic Order:  2676
Name:  ? AT4G26680 Secondary Identifier:  ? PAC:19648487
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G26680 0.5kb upstream 0.5kb upstream 2279 true Chr4: 13454353-13456631 Arabidopsis thaliana
AT4G26680 0.5kb upstream 0.5kb upstream 500 false Chr4: 13454353-13454852 Arabidopsis thaliana
AT4G26680 0.5kb downstream 0.5kb downstream 2279 true Chr4: 13454853-13457131 Arabidopsis thaliana
AT4G26680 0.5kb downstream 0.5kb downstream 500 false Chr4: 13456632-13457131 Arabidopsis thaliana
AT4G26680 1.0kb upstream 1.0kb upstream 2779 true Chr4: 13453853-13456631 Arabidopsis thaliana
AT4G26680 1.0kb upstream 1.0kb upstream 1000 false Chr4: 13453853-13454852 Arabidopsis thaliana
AT4G26680 1.0kb downstream 1.0kb downstream 2779 true Chr4: 13454853-13457631 Arabidopsis thaliana
AT4G26680 1.0kb downstream 1.0kb downstream 1000 false Chr4: 13456632-13457631 Arabidopsis thaliana
AT4G26680 2.0kb upstream 2.0kb upstream 3779 true Chr4: 13452853-13456631 Arabidopsis thaliana
AT4G26680 2.0kb upstream 2.0kb upstream 2000 false Chr4: 13452853-13454852 Arabidopsis thaliana
AT4G26680 2.0kb downstream 2.0kb downstream 3779 true Chr4: 13454853-13458631 Arabidopsis thaliana
AT4G26680 2.0kb downstream 2.0kb downstream 2000 false Chr4: 13456632-13458631 Arabidopsis thaliana
AT4G26680 5.0kb upstream 5.0kb upstream 6779 true Chr4: 13449853-13456631 Arabidopsis thaliana
AT4G26680 5.0kb upstream 5.0kb upstream 5000 false Chr4: 13449853-13454852 Arabidopsis thaliana
AT4G26680 5.0kb downstream 5.0kb downstream 6779 true Chr4: 13454853-13461631 Arabidopsis thaliana
AT4G26680 5.0kb downstream 5.0kb downstream 5000 false Chr4: 13456632-13461631 Arabidopsis thaliana
AT4G26680 10.0kb upstream 10.0kb upstream 11779 true Chr4: 13444853-13456631 Arabidopsis thaliana
AT4G26680 10.0kb upstream 10.0kb upstream 10000 false Chr4: 13444853-13454852 Arabidopsis thaliana
AT4G26680 10.0kb downstream 10.0kb downstream 11779 true Chr4: 13454853-13466631 Arabidopsis thaliana
AT4G26680 10.0kb downstream 10.0kb downstream 10000 false Chr4: 13456632-13466631 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361091 5261 Brassicaceae View MSA
123834165 5264 Brassicales-Malvales View MSA
124344064 5266 SBM View MSA
124239137 5268 Malvidae View MSA
124073519 5270 Rosid View MSA
123739768 5271 Pentapetalae View MSA
122797794 5272 Eudicot View MSA
122051419 5273 Angiosperm View MSA
123429046 5275 Viridiplantae View MSA
121351195 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.411        
cufflinks 0.55        
cufflinks 0.458        
cufflinks 0.674       High
cufflinks 0.329       Low
cufflinks 0.527        

0 Strain