Gene : ARF16 A. thaliana TAIR10
Primary Identifier:  ? AT4G30080 Defline:  (1 of 2) PTHR31384:SF27 - AUXIN RESPONSE FACTOR 10-RELATED
Genomic Order:  3049 Name:  ? AT4G30080
Secondary Identifier:  ? PAC:19644624
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30080 0.5kb upstream 0.5kb upstream 3636 true Chr4: 14703201-14706836 Arabidopsis thaliana
AT4G30080 0.5kb upstream 0.5kb upstream 500 false Chr4: 14706337-14706836 Arabidopsis thaliana
AT4G30080 0.5kb downstream 0.5kb downstream 3636 true Chr4: 14702701-14706336 Arabidopsis thaliana
AT4G30080 0.5kb downstream 0.5kb downstream 500 false Chr4: 14702701-14703200 Arabidopsis thaliana
AT4G30080 1.0kb upstream 1.0kb upstream 4136 true Chr4: 14703201-14707336 Arabidopsis thaliana
AT4G30080 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14706337-14707336 Arabidopsis thaliana
AT4G30080 1.0kb downstream 1.0kb downstream 4136 true Chr4: 14702201-14706336 Arabidopsis thaliana
AT4G30080 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14702201-14703200 Arabidopsis thaliana
AT4G30080 2.0kb upstream 2.0kb upstream 5136 true Chr4: 14703201-14708336 Arabidopsis thaliana
AT4G30080 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14706337-14708336 Arabidopsis thaliana
AT4G30080 2.0kb downstream 2.0kb downstream 5136 true Chr4: 14701201-14706336 Arabidopsis thaliana
AT4G30080 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14701201-14703200 Arabidopsis thaliana
AT4G30080 5.0kb upstream 5.0kb upstream 8136 true Chr4: 14703201-14711336 Arabidopsis thaliana
AT4G30080 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14706337-14711336 Arabidopsis thaliana
AT4G30080 5.0kb downstream 5.0kb downstream 8136 true Chr4: 14698201-14706336 Arabidopsis thaliana
AT4G30080 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14698201-14703200 Arabidopsis thaliana
AT4G30080 10.0kb upstream 10.0kb upstream 13136 true Chr4: 14703201-14716336 Arabidopsis thaliana
AT4G30080 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14706337-14716336 Arabidopsis thaliana
AT4G30080 10.0kb downstream 10.0kb downstream 13136 true Chr4: 14693201-14706336 Arabidopsis thaliana
AT4G30080 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14693201-14703200 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370197 5261 Brassicaceae View MSA
123829577 5264 Brassicales-Malvales View MSA
124341037 5266 SBM View MSA
124254214 5268 Malvidae View MSA
124069871 5270 Rosid View MSA
123753762 5271 Pentapetalae View MSA
122789105 5272 Eudicot View MSA
122049915 5273 Angiosperm View MSA
121351445 5274 Embryophyte View MSA
123428387 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.312        
cufflinks 6.509        
cufflinks 7.559        
cufflinks 8.762       High
cufflinks 6.615        
cufflinks 5.788       Low

0 Strain