Gene : ACA10 A. thaliana TAIR10
Primary Identifier:  ? AT4G29900 Defline:  (1 of 14) K01537 - Ca2+-transporting ATPase (E3.6.3.8)
Genomic Order:  3027 Name:  ? AT4G29900
Secondary Identifier:  ? PAC:19647222
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0 Pathways

Genomics

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Expression

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3 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G29900 0.5kb upstream 0.5kb upstream 9191 true Chr4: 14610883-14620073 Arabidopsis thaliana
AT4G29900 0.5kb upstream 0.5kb upstream 500 false Chr4: 14619574-14620073 Arabidopsis thaliana
AT4G29900 0.5kb downstream 0.5kb downstream 9191 true Chr4: 14610383-14619573 Arabidopsis thaliana
AT4G29900 0.5kb downstream 0.5kb downstream 500 false Chr4: 14610383-14610882 Arabidopsis thaliana
AT4G29900 1.0kb upstream 1.0kb upstream 9691 true Chr4: 14610883-14620573 Arabidopsis thaliana
AT4G29900 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14619574-14620573 Arabidopsis thaliana
AT4G29900 1.0kb downstream 1.0kb downstream 9691 true Chr4: 14609883-14619573 Arabidopsis thaliana
AT4G29900 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14609883-14610882 Arabidopsis thaliana
AT4G29900 2.0kb upstream 2.0kb upstream 10691 true Chr4: 14610883-14621573 Arabidopsis thaliana
AT4G29900 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14619574-14621573 Arabidopsis thaliana
AT4G29900 2.0kb downstream 2.0kb downstream 10691 true Chr4: 14608883-14619573 Arabidopsis thaliana
AT4G29900 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14608883-14610882 Arabidopsis thaliana
AT4G29900 5.0kb upstream 5.0kb upstream 13691 true Chr4: 14610883-14624573 Arabidopsis thaliana
AT4G29900 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14619574-14624573 Arabidopsis thaliana
AT4G29900 5.0kb downstream 5.0kb downstream 13691 true Chr4: 14605883-14619573 Arabidopsis thaliana
AT4G29900 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14605883-14610882 Arabidopsis thaliana
AT4G29900 10.0kb upstream 10.0kb upstream 18691 true Chr4: 14610883-14629573 Arabidopsis thaliana
AT4G29900 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14619574-14629573 Arabidopsis thaliana
AT4G29900 10.0kb downstream 10.0kb downstream 18691 true Chr4: 14600883-14619573 Arabidopsis thaliana
AT4G29900 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14600883-14610882 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367341 5261 Brassicaceae View MSA
123829821 5264 Brassicales-Malvales View MSA
124348929 5266 SBM View MSA
124254628 5268 Malvidae View MSA
124063476 5270 Rosid View MSA
123739900 5271 Pentapetalae View MSA
122792440 5272 Eudicot View MSA
122044045 5273 Angiosperm View MSA
121346260 5274 Embryophyte View MSA
123428805 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 23.189       High
cufflinks 11.906        
cufflinks 14.041        
cufflinks 12.675        
cufflinks 20.251        
cufflinks 13.569        

0 Strain