Gene : MTO2 A. thaliana TAIR10
Primary Identifier:  ? AT4G29840 Defline:  (1 of 2) 4.2.3.1 - Threonine synthase
Genomic Order:  3021 Name:  ? AT4G29840
Secondary Identifier:  ? PAC:19645737
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Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana HOMOSER-THRESYN-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-3001 Arabidopsis thaliana pathologic  
Athaliana PWY-724 Arabidopsis thaliana pathologic  
Athaliana THRESYN-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G29840 0.5kb upstream 0.5kb upstream 2340 true Chr4: 14599216-14601555 Arabidopsis thaliana
AT4G29840 0.5kb upstream 0.5kb upstream 500 false Chr4: 14601056-14601555 Arabidopsis thaliana
AT4G29840 0.5kb downstream 0.5kb downstream 2340 true Chr4: 14598716-14601055 Arabidopsis thaliana
AT4G29840 0.5kb downstream 0.5kb downstream 500 false Chr4: 14598716-14599215 Arabidopsis thaliana
AT4G29840 1.0kb upstream 1.0kb upstream 2840 true Chr4: 14599216-14602055 Arabidopsis thaliana
AT4G29840 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14601056-14602055 Arabidopsis thaliana
AT4G29840 1.0kb downstream 1.0kb downstream 2840 true Chr4: 14598216-14601055 Arabidopsis thaliana
AT4G29840 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14598216-14599215 Arabidopsis thaliana
AT4G29840 2.0kb upstream 2.0kb upstream 3840 true Chr4: 14599216-14603055 Arabidopsis thaliana
AT4G29840 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14601056-14603055 Arabidopsis thaliana
AT4G29840 2.0kb downstream 2.0kb downstream 3840 true Chr4: 14597216-14601055 Arabidopsis thaliana
AT4G29840 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14597216-14599215 Arabidopsis thaliana
AT4G29840 5.0kb upstream 5.0kb upstream 6840 true Chr4: 14599216-14606055 Arabidopsis thaliana
AT4G29840 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14601056-14606055 Arabidopsis thaliana
AT4G29840 5.0kb downstream 5.0kb downstream 6840 true Chr4: 14594216-14601055 Arabidopsis thaliana
AT4G29840 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14594216-14599215 Arabidopsis thaliana
AT4G29840 10.0kb upstream 10.0kb upstream 11840 true Chr4: 14599216-14611055 Arabidopsis thaliana
AT4G29840 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14601056-14611055 Arabidopsis thaliana
AT4G29840 10.0kb downstream 10.0kb downstream 11840 true Chr4: 14589216-14601055 Arabidopsis thaliana
AT4G29840 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14589216-14599215 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041159 5273 Angiosperm View MSA
122377417 5261 Brassicaceae View MSA
123835484 5264 Brassicales-Malvales View MSA
124336833 5266 SBM View MSA
124251759 5268 Malvidae View MSA
124069376 5270 Rosid View MSA
123748441 5271 Pentapetalae View MSA
122786729 5272 Eudicot View MSA
121349368 5274 Embryophyte View MSA
123424940 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 61.493     High Low
cufflinks 71.484     High  
cufflinks 97.011     High High
cufflinks 80.738     High  
cufflinks 63.871     High  
cufflinks 82.992     High  

0 Strain