Gene : AT4G29570 A. thaliana TAIR10
Defline:  (1 of 9) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  2991
Name:  ? AT4G29570 Secondary Identifier:  ? PAC:19647861
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6556 Arabidopsis thaliana pathologic  
Athaliana PWY-7193 Arabidopsis thaliana pathologic  
Athaliana PWY-7196 Arabidopsis thaliana pathologic  
Athaliana PWY-7199 Arabidopsis thaliana pathologic  
Athaliana PWY-7200 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G29570 0.5kb upstream 0.5kb upstream 1585 true Chr4: 14506898-14508482 Arabidopsis thaliana
AT4G29570 0.5kb upstream 0.5kb upstream 500 false Chr4: 14506898-14507397 Arabidopsis thaliana
AT4G29570 0.5kb downstream 0.5kb downstream 1585 true Chr4: 14507398-14508982 Arabidopsis thaliana
AT4G29570 0.5kb downstream 0.5kb downstream 500 false Chr4: 14508483-14508982 Arabidopsis thaliana
AT4G29570 1.0kb upstream 1.0kb upstream 2085 true Chr4: 14506398-14508482 Arabidopsis thaliana
AT4G29570 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14506398-14507397 Arabidopsis thaliana
AT4G29570 1.0kb downstream 1.0kb downstream 2085 true Chr4: 14507398-14509482 Arabidopsis thaliana
AT4G29570 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14508483-14509482 Arabidopsis thaliana
AT4G29570 2.0kb upstream 2.0kb upstream 3085 true Chr4: 14505398-14508482 Arabidopsis thaliana
AT4G29570 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14505398-14507397 Arabidopsis thaliana
AT4G29570 2.0kb downstream 2.0kb downstream 3085 true Chr4: 14507398-14510482 Arabidopsis thaliana
AT4G29570 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14508483-14510482 Arabidopsis thaliana
AT4G29570 5.0kb upstream 5.0kb upstream 6085 true Chr4: 14502398-14508482 Arabidopsis thaliana
AT4G29570 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14502398-14507397 Arabidopsis thaliana
AT4G29570 5.0kb downstream 5.0kb downstream 6085 true Chr4: 14507398-14513482 Arabidopsis thaliana
AT4G29570 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14508483-14513482 Arabidopsis thaliana
AT4G29570 10.0kb upstream 10.0kb upstream 11085 true Chr4: 14497398-14508482 Arabidopsis thaliana
AT4G29570 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14497398-14507397 Arabidopsis thaliana
AT4G29570 10.0kb downstream 10.0kb downstream 11085 true Chr4: 14507398-14518482 Arabidopsis thaliana
AT4G29570 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14508483-14518482 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332057 5261 Brassicaceae View MSA
123773173 5264 Brassicales-Malvales View MSA
124271670 5266 SBM View MSA
124127636 5268 Malvidae View MSA
123856465 5270 Rosid View MSA
123744425 5271 Pentapetalae View MSA
122793352 5272 Eudicot View MSA
122048037 5273 Angiosperm View MSA
121343942 5274 Embryophyte View MSA
123424852 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.134     Low  
cufflinks 0.07     Low  
cufflinks 0.02     Low Low
cufflinks 0.249     Low  
cufflinks 0.3        
cufflinks 0.0     Not Expressed Not Expressed

0 Strain