Gene : AT4G29630 A. thaliana TAIR10
Defline:  (1 of 9) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  2997
Name:  ? AT4G29630 Secondary Identifier:  ? PAC:19647691
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5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana PWY-6556 Arabidopsis thaliana pathologic  
Athaliana PWY-7193 Arabidopsis thaliana pathologic  
Athaliana PWY-7196 Arabidopsis thaliana pathologic  
Athaliana PWY-7199 Arabidopsis thaliana pathologic  
Athaliana PWY-7200 Arabidopsis thaliana pathologic  

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G29630 0.5kb upstream 0.5kb upstream 1172 true Chr4: 14522069-14523240 Arabidopsis thaliana
AT4G29630 0.5kb upstream 0.5kb upstream 500 false Chr4: 14522069-14522568 Arabidopsis thaliana
AT4G29630 0.5kb downstream 0.5kb downstream 1172 true Chr4: 14522569-14523740 Arabidopsis thaliana
AT4G29630 0.5kb downstream 0.5kb downstream 500 false Chr4: 14523241-14523740 Arabidopsis thaliana
AT4G29630 1.0kb upstream 1.0kb upstream 1672 true Chr4: 14521569-14523240 Arabidopsis thaliana
AT4G29630 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14521569-14522568 Arabidopsis thaliana
AT4G29630 1.0kb downstream 1.0kb downstream 1672 true Chr4: 14522569-14524240 Arabidopsis thaliana
AT4G29630 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14523241-14524240 Arabidopsis thaliana
AT4G29630 2.0kb upstream 2.0kb upstream 2672 true Chr4: 14520569-14523240 Arabidopsis thaliana
AT4G29630 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14520569-14522568 Arabidopsis thaliana
AT4G29630 2.0kb downstream 2.0kb downstream 2672 true Chr4: 14522569-14525240 Arabidopsis thaliana
AT4G29630 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14523241-14525240 Arabidopsis thaliana
AT4G29630 5.0kb upstream 5.0kb upstream 5672 true Chr4: 14517569-14523240 Arabidopsis thaliana
AT4G29630 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14517569-14522568 Arabidopsis thaliana
AT4G29630 5.0kb downstream 5.0kb downstream 5672 true Chr4: 14522569-14528240 Arabidopsis thaliana
AT4G29630 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14523241-14528240 Arabidopsis thaliana
AT4G29630 10.0kb upstream 10.0kb upstream 10672 true Chr4: 14512569-14523240 Arabidopsis thaliana
AT4G29630 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14512569-14522568 Arabidopsis thaliana
AT4G29630 10.0kb downstream 10.0kb downstream 10672 true Chr4: 14522569-14533240 Arabidopsis thaliana
AT4G29630 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14523241-14533240 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121494882 5273 Angiosperm Singleton cluster - no MSA
122330713 5261 Brassicaceae Singleton cluster - no MSA
123771939 5264 Brassicales-Malvales Singleton cluster - no MSA
124270462 5266 SBM Singleton cluster - no MSA
124126531 5268 Malvidae Singleton cluster - no MSA
123855437 5270 Rosid Singleton cluster - no MSA
123441417 5271 Pentapetalae Singleton cluster - no MSA
122477002 5272 Eudicot Singleton cluster - no MSA
120768249 5274 Embryophyte Singleton cluster - no MSA
122810638 5275 Viridiplantae Singleton cluster - no MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.0     Not Expressed Not Expressed

0 Strain