Sequence Feature Displayer
Ontology Annotation Displayer
5 Pathways
Pathway Identifier | Organism Name | Analysis Method | Analysis Status |
---|---|---|---|
Athaliana PWY-6556 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7193 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7196 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7199 | Arabidopsis thaliana | pathologic | |
Athaliana PWY-7200 | Arabidopsis thaliana | pathologic |
Other
20 Flanking Regions
Region Name | Flank Size | Direction | Length | Gene Included? | Chromosome Location | Organism Name |
---|---|---|---|---|---|---|
AT4G29600 0.5kb upstream | 0.5kb | upstream | 1424 | true | Chr4: 14515078-14516501 | Arabidopsis thaliana |
AT4G29600 0.5kb upstream | 0.5kb | upstream | 500 | false | Chr4: 14515078-14515577 | Arabidopsis thaliana |
AT4G29600 0.5kb downstream | 0.5kb | downstream | 1424 | true | Chr4: 14515578-14517001 | Arabidopsis thaliana |
AT4G29600 0.5kb downstream | 0.5kb | downstream | 500 | false | Chr4: 14516502-14517001 | Arabidopsis thaliana |
AT4G29600 1.0kb upstream | 1.0kb | upstream | 1924 | true | Chr4: 14514578-14516501 | Arabidopsis thaliana |
AT4G29600 1.0kb upstream | 1.0kb | upstream | 1000 | false | Chr4: 14514578-14515577 | Arabidopsis thaliana |
AT4G29600 1.0kb downstream | 1.0kb | downstream | 1924 | true | Chr4: 14515578-14517501 | Arabidopsis thaliana |
AT4G29600 1.0kb downstream | 1.0kb | downstream | 1000 | false | Chr4: 14516502-14517501 | Arabidopsis thaliana |
AT4G29600 2.0kb upstream | 2.0kb | upstream | 2924 | true | Chr4: 14513578-14516501 | Arabidopsis thaliana |
AT4G29600 2.0kb upstream | 2.0kb | upstream | 2000 | false | Chr4: 14513578-14515577 | Arabidopsis thaliana |
AT4G29600 2.0kb downstream | 2.0kb | downstream | 2924 | true | Chr4: 14515578-14518501 | Arabidopsis thaliana |
AT4G29600 2.0kb downstream | 2.0kb | downstream | 2000 | false | Chr4: 14516502-14518501 | Arabidopsis thaliana |
AT4G29600 5.0kb upstream | 5.0kb | upstream | 5924 | true | Chr4: 14510578-14516501 | Arabidopsis thaliana |
AT4G29600 5.0kb upstream | 5.0kb | upstream | 5000 | false | Chr4: 14510578-14515577 | Arabidopsis thaliana |
AT4G29600 5.0kb downstream | 5.0kb | downstream | 5924 | true | Chr4: 14515578-14521501 | Arabidopsis thaliana |
AT4G29600 5.0kb downstream | 5.0kb | downstream | 5000 | false | Chr4: 14516502-14521501 | Arabidopsis thaliana |
AT4G29600 10.0kb upstream | 10.0kb | upstream | 10924 | true | Chr4: 14505578-14516501 | Arabidopsis thaliana |
AT4G29600 10.0kb upstream | 10.0kb | upstream | 10000 | false | Chr4: 14505578-14515577 | Arabidopsis thaliana |
AT4G29600 10.0kb downstream | 10.0kb | downstream | 10924 | true | Chr4: 14515578-14526501 | Arabidopsis thaliana |
AT4G29600 10.0kb downstream | 10.0kb | downstream | 10000 | false | Chr4: 14516502-14526501 | Arabidopsis thaliana |
10 Protein Familys
Cluster ID | Method ID | Method Name | Sequence Alignment |
---|---|---|---|
122338261 | 5261 | Brassicaceae | View MSA |
123839427 | 5264 | Brassicales-Malvales | View MSA |
124337492 | 5266 | SBM | View MSA |
124238889 | 5268 | Malvidae | View MSA |
124068161 | 5270 | Rosid | View MSA |
123744425 | 5271 | Pentapetalae | View MSA |
122793352 | 5272 | Eudicot | View MSA |
122048037 | 5273 | Angiosperm | View MSA |
121343942 | 5274 | Embryophyte | View MSA |
123424852 | 5275 | Viridiplantae | View MSA |
6 Rna Seq Expressionss
Analysis Method | Abundance | Low Confidence Limit | High Confidence Limit | Relative Library Expression | Relative Locus Expression |
---|---|---|---|---|---|
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.032 | Low | |||
cufflinks | 0.149 | Low | High | ||
cufflinks | 0.0 | Not Expressed | Not Expressed | ||
cufflinks | 0.066 | Low | |||
cufflinks | 0.0 | Not Expressed | Not Expressed |