Gene : AT4G29480 A. thaliana TAIR10

Defline:  (1 of 3) K02140 - F-type H+-transporting ATPase subunit g (ATPeFG, ATP5L, ATP20) Genomic Order:  2982
Name:  ? AT4G29480 Secondary Identifier:  ? PAC:19645046

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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G29480 0.5kb upstream 0.5kb upstream 2237 true Chr4: 14486041-14488277 Arabidopsis thaliana
AT4G29480 0.5kb upstream 0.5kb upstream 500 false Chr4: 14487778-14488277 Arabidopsis thaliana
AT4G29480 0.5kb downstream 0.5kb downstream 2237 true Chr4: 14485541-14487777 Arabidopsis thaliana
AT4G29480 0.5kb downstream 0.5kb downstream 500 false Chr4: 14485541-14486040 Arabidopsis thaliana
AT4G29480 1.0kb upstream 1.0kb upstream 2737 true Chr4: 14486041-14488777 Arabidopsis thaliana
AT4G29480 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14487778-14488777 Arabidopsis thaliana
AT4G29480 1.0kb downstream 1.0kb downstream 2737 true Chr4: 14485041-14487777 Arabidopsis thaliana
AT4G29480 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14485041-14486040 Arabidopsis thaliana
AT4G29480 2.0kb upstream 2.0kb upstream 3737 true Chr4: 14486041-14489777 Arabidopsis thaliana
AT4G29480 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14487778-14489777 Arabidopsis thaliana
AT4G29480 2.0kb downstream 2.0kb downstream 3737 true Chr4: 14484041-14487777 Arabidopsis thaliana
AT4G29480 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14484041-14486040 Arabidopsis thaliana
AT4G29480 5.0kb upstream 5.0kb upstream 6737 true Chr4: 14486041-14492777 Arabidopsis thaliana
AT4G29480 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14487778-14492777 Arabidopsis thaliana
AT4G29480 5.0kb downstream 5.0kb downstream 6737 true Chr4: 14481041-14487777 Arabidopsis thaliana
AT4G29480 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14481041-14486040 Arabidopsis thaliana
AT4G29480 10.0kb upstream 10.0kb upstream 11737 true Chr4: 14486041-14497777 Arabidopsis thaliana
AT4G29480 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14487778-14497777 Arabidopsis thaliana
AT4G29480 10.0kb downstream 10.0kb downstream 11737 true Chr4: 14476041-14487777 Arabidopsis thaliana
AT4G29480 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14476041-14486040 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374085 5261 Brassicaceae View MSA
123835770 5264 Brassicales-Malvales View MSA
124346729 5266 SBM View MSA
124244909 5268 Malvidae View MSA
124061170 5270 Rosid View MSA
123750868 5271 Pentapetalae View MSA
122796122 5272 Eudicot View MSA
122043209 5273 Angiosperm View MSA
121346657 5274 Embryophyte View MSA
123428530 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.577     High  
cufflinks 43.191     High  
cufflinks 34.274     High  
cufflinks 44.126     High  
cufflinks 34.469     High  
cufflinks 46.883     High High

0 Strain