Gene : AT4G29190 A. thaliana TAIR10
Defline:  (1 of 4) KOG1595 - CCCH-type Zn-finger protein Genomic Order:  2950
Name:  ? AT4G29190 Secondary Identifier:  ? PAC:19648857
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G29190 0.5kb upstream 0.5kb upstream 1936 true Chr4: 14391938-14393873 Arabidopsis thaliana
AT4G29190 0.5kb upstream 0.5kb upstream 500 false Chr4: 14393374-14393873 Arabidopsis thaliana
AT4G29190 0.5kb downstream 0.5kb downstream 1936 true Chr4: 14391438-14393373 Arabidopsis thaliana
AT4G29190 0.5kb downstream 0.5kb downstream 500 false Chr4: 14391438-14391937 Arabidopsis thaliana
AT4G29190 1.0kb upstream 1.0kb upstream 2436 true Chr4: 14391938-14394373 Arabidopsis thaliana
AT4G29190 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14393374-14394373 Arabidopsis thaliana
AT4G29190 1.0kb downstream 1.0kb downstream 2436 true Chr4: 14390938-14393373 Arabidopsis thaliana
AT4G29190 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14390938-14391937 Arabidopsis thaliana
AT4G29190 2.0kb upstream 2.0kb upstream 3436 true Chr4: 14391938-14395373 Arabidopsis thaliana
AT4G29190 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14393374-14395373 Arabidopsis thaliana
AT4G29190 2.0kb downstream 2.0kb downstream 3436 true Chr4: 14389938-14393373 Arabidopsis thaliana
AT4G29190 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14389938-14391937 Arabidopsis thaliana
AT4G29190 5.0kb upstream 5.0kb upstream 6436 true Chr4: 14391938-14398373 Arabidopsis thaliana
AT4G29190 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14393374-14398373 Arabidopsis thaliana
AT4G29190 5.0kb downstream 5.0kb downstream 6436 true Chr4: 14386938-14393373 Arabidopsis thaliana
AT4G29190 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14386938-14391937 Arabidopsis thaliana
AT4G29190 10.0kb upstream 10.0kb upstream 11436 true Chr4: 14391938-14403373 Arabidopsis thaliana
AT4G29190 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14393374-14403373 Arabidopsis thaliana
AT4G29190 10.0kb downstream 10.0kb downstream 11436 true Chr4: 14381938-14393373 Arabidopsis thaliana
AT4G29190 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14381938-14391937 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367977 5261 Brassicaceae View MSA
123841324 5264 Brassicales-Malvales View MSA
124344801 5266 SBM View MSA
124248474 5268 Malvidae View MSA
124070432 5270 Rosid View MSA
123751061 5271 Pentapetalae View MSA
122788502 5272 Eudicot View MSA
122046777 5273 Angiosperm View MSA
123429052 5275 Viridiplantae View MSA
121351105 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.044     High  
cufflinks 26.616        
cufflinks 50.853     High  
cufflinks 38.982     High  
cufflinks 104.569     High High
cufflinks 18.719       Low

0 Strain