Gene : AIM1 A. thaliana TAIR10
Primary Identifier:  ? AT4G29010 Defline:  (1 of 1) 1.1.1.35//4.2.1.17//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA epimerase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase
Genomic Order:  2929 Name:  ? AT4G29010
Secondary Identifier:  ? PAC:19644995
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Athaliana ILEUDEG-PWY Arabidopsis thaliana pathologic  
Athaliana PWY-5136 Arabidopsis thaliana pathologic  
Athaliana PWY-5137 Arabidopsis thaliana pathologic  
Athaliana PWY-5138 Arabidopsis thaliana pathologic  
Athaliana PWY-561 Arabidopsis thaliana pathologic  
Athaliana PWY-6435 Arabidopsis thaliana pathologic  
Athaliana PWY-6837 Arabidopsis thaliana pathologic  
Athaliana PWY-7036 Arabidopsis thaliana pathologic  
Athaliana PWY-735 Arabidopsis thaliana pathologic  
Athaliana PWY-7606 Arabidopsis thaliana pathologic  
Athaliana VALDEG-PWY Arabidopsis thaliana pathologic  

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G29010 0.5kb upstream 0.5kb upstream 5604 true Chr4: 14297044-14302647 Arabidopsis thaliana
AT4G29010 0.5kb upstream 0.5kb upstream 500 false Chr4: 14302148-14302647 Arabidopsis thaliana
AT4G29010 0.5kb downstream 0.5kb downstream 5604 true Chr4: 14296544-14302147 Arabidopsis thaliana
AT4G29010 0.5kb downstream 0.5kb downstream 500 false Chr4: 14296544-14297043 Arabidopsis thaliana
AT4G29010 1.0kb upstream 1.0kb upstream 6104 true Chr4: 14297044-14303147 Arabidopsis thaliana
AT4G29010 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14302148-14303147 Arabidopsis thaliana
AT4G29010 1.0kb downstream 1.0kb downstream 6104 true Chr4: 14296044-14302147 Arabidopsis thaliana
AT4G29010 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14296044-14297043 Arabidopsis thaliana
AT4G29010 2.0kb upstream 2.0kb upstream 7104 true Chr4: 14297044-14304147 Arabidopsis thaliana
AT4G29010 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14302148-14304147 Arabidopsis thaliana
AT4G29010 2.0kb downstream 2.0kb downstream 7104 true Chr4: 14295044-14302147 Arabidopsis thaliana
AT4G29010 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14295044-14297043 Arabidopsis thaliana
AT4G29010 5.0kb upstream 5.0kb upstream 10104 true Chr4: 14297044-14307147 Arabidopsis thaliana
AT4G29010 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14302148-14307147 Arabidopsis thaliana
AT4G29010 5.0kb downstream 5.0kb downstream 10104 true Chr4: 14292044-14302147 Arabidopsis thaliana
AT4G29010 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14292044-14297043 Arabidopsis thaliana
AT4G29010 10.0kb upstream 10.0kb upstream 15104 true Chr4: 14297044-14312147 Arabidopsis thaliana
AT4G29010 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14302148-14312147 Arabidopsis thaliana
AT4G29010 10.0kb downstream 10.0kb downstream 15104 true Chr4: 14287044-14302147 Arabidopsis thaliana
AT4G29010 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14287044-14297043 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375346 5261 Brassicaceae View MSA
123827645 5264 Brassicales-Malvales View MSA
124340357 5266 SBM View MSA
124241390 5268 Malvidae View MSA
124067540 5270 Rosid View MSA
123736586 5271 Pentapetalae View MSA
122787212 5272 Eudicot View MSA
122047578 5273 Angiosperm View MSA
121310763 5274 Embryophyte View MSA
123348170 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.335     High  
cufflinks 25.203        
cufflinks 50.202     High  
cufflinks 26.947        
cufflinks 58.48     High High
cufflinks 22.76       Low

0 Strain