Gene : NINJA A. thaliana TAIR10
Primary Identifier:  ? AT4G28910 Defline:  (1 of 1) PTHR31413:SF2 - AFP HOMOLOG 2
Genomic Order:  2921 Name:  ? AT4G28910
Secondary Identifier:  ? PAC:19647532
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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28910 0.5kb upstream 0.5kb upstream 3183 true Chr4: 14264067-14267249 Arabidopsis thaliana
AT4G28910 0.5kb upstream 0.5kb upstream 500 false Chr4: 14266750-14267249 Arabidopsis thaliana
AT4G28910 0.5kb downstream 0.5kb downstream 3183 true Chr4: 14263567-14266749 Arabidopsis thaliana
AT4G28910 0.5kb downstream 0.5kb downstream 500 false Chr4: 14263567-14264066 Arabidopsis thaliana
AT4G28910 1.0kb upstream 1.0kb upstream 3683 true Chr4: 14264067-14267749 Arabidopsis thaliana
AT4G28910 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14266750-14267749 Arabidopsis thaliana
AT4G28910 1.0kb downstream 1.0kb downstream 3683 true Chr4: 14263067-14266749 Arabidopsis thaliana
AT4G28910 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14263067-14264066 Arabidopsis thaliana
AT4G28910 2.0kb upstream 2.0kb upstream 4683 true Chr4: 14264067-14268749 Arabidopsis thaliana
AT4G28910 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14266750-14268749 Arabidopsis thaliana
AT4G28910 2.0kb downstream 2.0kb downstream 4683 true Chr4: 14262067-14266749 Arabidopsis thaliana
AT4G28910 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14262067-14264066 Arabidopsis thaliana
AT4G28910 5.0kb upstream 5.0kb upstream 7683 true Chr4: 14264067-14271749 Arabidopsis thaliana
AT4G28910 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14266750-14271749 Arabidopsis thaliana
AT4G28910 5.0kb downstream 5.0kb downstream 7683 true Chr4: 14259067-14266749 Arabidopsis thaliana
AT4G28910 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14259067-14264066 Arabidopsis thaliana
AT4G28910 10.0kb upstream 10.0kb upstream 12683 true Chr4: 14264067-14276749 Arabidopsis thaliana
AT4G28910 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14266750-14276749 Arabidopsis thaliana
AT4G28910 10.0kb downstream 10.0kb downstream 12683 true Chr4: 14254067-14266749 Arabidopsis thaliana
AT4G28910 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14254067-14264066 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361687 5261 Brassicaceae View MSA
123831156 5264 Brassicales-Malvales View MSA
124339681 5266 SBM View MSA
124239021 5268 Malvidae View MSA
124067449 5270 Rosid View MSA
123751299 5271 Pentapetalae View MSA
122788952 5272 Eudicot View MSA
122043015 5273 Angiosperm View MSA
121310063 5274 Embryophyte View MSA
123347659 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 9.18        
cufflinks 14.678        
cufflinks 9.209        
cufflinks 15.51        
cufflinks 9.823        
cufflinks 15.78       High

0 Strain