Gene : PSAE-1 A. thaliana TAIR10
Primary Identifier:  ? AT4G28750 Defline:  (1 of 2) K02693 - photosystem I subunit IV (psaE)
Genomic Order:  2904 Name:  ? AT4G28750
Secondary Identifier:  ? PAC:19645118
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28750 0.5kb upstream 0.5kb upstream 1704 true Chr4: 14202758-14204461 Arabidopsis thaliana
AT4G28750 0.5kb upstream 0.5kb upstream 500 false Chr4: 14203962-14204461 Arabidopsis thaliana
AT4G28750 0.5kb downstream 0.5kb downstream 1704 true Chr4: 14202258-14203961 Arabidopsis thaliana
AT4G28750 0.5kb downstream 0.5kb downstream 500 false Chr4: 14202258-14202757 Arabidopsis thaliana
AT4G28750 1.0kb upstream 1.0kb upstream 2204 true Chr4: 14202758-14204961 Arabidopsis thaliana
AT4G28750 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14203962-14204961 Arabidopsis thaliana
AT4G28750 1.0kb downstream 1.0kb downstream 2204 true Chr4: 14201758-14203961 Arabidopsis thaliana
AT4G28750 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14201758-14202757 Arabidopsis thaliana
AT4G28750 2.0kb upstream 2.0kb upstream 3204 true Chr4: 14202758-14205961 Arabidopsis thaliana
AT4G28750 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14203962-14205961 Arabidopsis thaliana
AT4G28750 2.0kb downstream 2.0kb downstream 3204 true Chr4: 14200758-14203961 Arabidopsis thaliana
AT4G28750 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14200758-14202757 Arabidopsis thaliana
AT4G28750 5.0kb upstream 5.0kb upstream 6204 true Chr4: 14202758-14208961 Arabidopsis thaliana
AT4G28750 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14203962-14208961 Arabidopsis thaliana
AT4G28750 5.0kb downstream 5.0kb downstream 6204 true Chr4: 14197758-14203961 Arabidopsis thaliana
AT4G28750 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14197758-14202757 Arabidopsis thaliana
AT4G28750 10.0kb upstream 10.0kb upstream 11204 true Chr4: 14202758-14213961 Arabidopsis thaliana
AT4G28750 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14203962-14213961 Arabidopsis thaliana
AT4G28750 10.0kb downstream 10.0kb downstream 11204 true Chr4: 14192758-14203961 Arabidopsis thaliana
AT4G28750 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14192758-14202757 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377467 5261 Brassicaceae View MSA
123840896 5264 Brassicales-Malvales View MSA
124339470 5266 SBM View MSA
124244630 5268 Malvidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 584.36     High  
cufflinks 2.613        
cufflinks 1023.147     High  
cufflinks 2.852        
cufflinks 961.07     High  
cufflinks 1.693       Low

0 Strain