Gene : AT4G28550 A. thaliana TAIR10
Defline:  (1 of 2) PTHR22957:SF299 - RABGAP/TBC DOMAIN-CONTAINING PROTEIN Genomic Order:  2880
Name:  ? AT4G28550 Secondary Identifier:  ? PAC:19644360
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28550 0.5kb upstream 0.5kb upstream 3365 true Chr4: 14110384-14113748 Arabidopsis thaliana
AT4G28550 0.5kb upstream 0.5kb upstream 500 false Chr4: 14110384-14110883 Arabidopsis thaliana
AT4G28550 0.5kb downstream 0.5kb downstream 3365 true Chr4: 14110884-14114248 Arabidopsis thaliana
AT4G28550 0.5kb downstream 0.5kb downstream 500 false Chr4: 14113749-14114248 Arabidopsis thaliana
AT4G28550 1.0kb upstream 1.0kb upstream 3865 true Chr4: 14109884-14113748 Arabidopsis thaliana
AT4G28550 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14109884-14110883 Arabidopsis thaliana
AT4G28550 1.0kb downstream 1.0kb downstream 3865 true Chr4: 14110884-14114748 Arabidopsis thaliana
AT4G28550 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14113749-14114748 Arabidopsis thaliana
AT4G28550 2.0kb upstream 2.0kb upstream 4865 true Chr4: 14108884-14113748 Arabidopsis thaliana
AT4G28550 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14108884-14110883 Arabidopsis thaliana
AT4G28550 2.0kb downstream 2.0kb downstream 4865 true Chr4: 14110884-14115748 Arabidopsis thaliana
AT4G28550 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14113749-14115748 Arabidopsis thaliana
AT4G28550 5.0kb upstream 5.0kb upstream 7865 true Chr4: 14105884-14113748 Arabidopsis thaliana
AT4G28550 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14105884-14110883 Arabidopsis thaliana
AT4G28550 5.0kb downstream 5.0kb downstream 7865 true Chr4: 14110884-14118748 Arabidopsis thaliana
AT4G28550 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14113749-14118748 Arabidopsis thaliana
AT4G28550 10.0kb upstream 10.0kb upstream 12865 true Chr4: 14100884-14113748 Arabidopsis thaliana
AT4G28550 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14100884-14110883 Arabidopsis thaliana
AT4G28550 10.0kb downstream 10.0kb downstream 12865 true Chr4: 14110884-14123748 Arabidopsis thaliana
AT4G28550 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14113749-14123748 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381010 5261 Brassicaceae View MSA
123840738 5264 Brassicales-Malvales View MSA
124339091 5266 SBM View MSA
124238265 5268 Malvidae View MSA
124067717 5270 Rosid View MSA
123747965 5271 Pentapetalae View MSA
122785951 5272 Eudicot View MSA
122051014 5273 Angiosperm View MSA
121350403 5274 Embryophyte View MSA
123428253 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.343        
cufflinks 8.864       High
cufflinks 2.01       Low
cufflinks 6.797        
cufflinks 2.358        
cufflinks 8.394        

0 Strain