Gene : PHR1 A. thaliana TAIR10
Primary Identifier:  ? AT4G28610 Defline:  (1 of 3) PTHR31314//PTHR31314:SF12 - FAMILY NOT NAMED // MYB FAMILY TRANSCRIPTION FACTOR-RELATED
Genomic Order:  2888 Name:  ? AT4G28610
Secondary Identifier:  ? PAC:19646814
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Genomics

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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28610 0.5kb upstream 0.5kb upstream 2904 true Chr4: 14132856-14135759 Arabidopsis thaliana
AT4G28610 0.5kb upstream 0.5kb upstream 500 false Chr4: 14135260-14135759 Arabidopsis thaliana
AT4G28610 0.5kb downstream 0.5kb downstream 2904 true Chr4: 14132356-14135259 Arabidopsis thaliana
AT4G28610 0.5kb downstream 0.5kb downstream 500 false Chr4: 14132356-14132855 Arabidopsis thaliana
AT4G28610 1.0kb upstream 1.0kb upstream 3404 true Chr4: 14132856-14136259 Arabidopsis thaliana
AT4G28610 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14135260-14136259 Arabidopsis thaliana
AT4G28610 1.0kb downstream 1.0kb downstream 3404 true Chr4: 14131856-14135259 Arabidopsis thaliana
AT4G28610 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14131856-14132855 Arabidopsis thaliana
AT4G28610 2.0kb upstream 2.0kb upstream 4404 true Chr4: 14132856-14137259 Arabidopsis thaliana
AT4G28610 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14135260-14137259 Arabidopsis thaliana
AT4G28610 2.0kb downstream 2.0kb downstream 4404 true Chr4: 14130856-14135259 Arabidopsis thaliana
AT4G28610 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14130856-14132855 Arabidopsis thaliana
AT4G28610 5.0kb upstream 5.0kb upstream 7404 true Chr4: 14132856-14140259 Arabidopsis thaliana
AT4G28610 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14135260-14140259 Arabidopsis thaliana
AT4G28610 5.0kb downstream 5.0kb downstream 7404 true Chr4: 14127856-14135259 Arabidopsis thaliana
AT4G28610 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14127856-14132855 Arabidopsis thaliana
AT4G28610 10.0kb upstream 10.0kb upstream 12404 true Chr4: 14132856-14145259 Arabidopsis thaliana
AT4G28610 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14135260-14145259 Arabidopsis thaliana
AT4G28610 10.0kb downstream 10.0kb downstream 12404 true Chr4: 14122856-14135259 Arabidopsis thaliana
AT4G28610 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14122856-14132855 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365144 5261 Brassicaceae View MSA
123828600 5264 Brassicales-Malvales View MSA
124340306 5266 SBM View MSA
124243908 5268 Malvidae View MSA
124060455 5270 Rosid View MSA
123746543 5271 Pentapetalae View MSA
122793337 5272 Eudicot View MSA
122046922 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349882 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 22.985       High
cufflinks 17.344       Low
cufflinks 19.652        
cufflinks 19.624        
cufflinks 22.642       High
cufflinks 18.251        

0 Strain