Gene : AT4G28450 A. thaliana TAIR10
Defline:  (1 of 1) K11806 - WD repeat and SOF domain-containing protein 1 (WDSOF1) Genomic Order:  2869
Name:  ? AT4G28450 Secondary Identifier:  ? PAC:19648741
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28450 0.5kb upstream 0.5kb upstream 3750 true Chr4: 14061459-14065208 Arabidopsis thaliana
AT4G28450 0.5kb upstream 0.5kb upstream 500 false Chr4: 14064709-14065208 Arabidopsis thaliana
AT4G28450 0.5kb downstream 0.5kb downstream 3750 true Chr4: 14060959-14064708 Arabidopsis thaliana
AT4G28450 0.5kb downstream 0.5kb downstream 500 false Chr4: 14060959-14061458 Arabidopsis thaliana
AT4G28450 1.0kb upstream 1.0kb upstream 4250 true Chr4: 14061459-14065708 Arabidopsis thaliana
AT4G28450 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14064709-14065708 Arabidopsis thaliana
AT4G28450 1.0kb downstream 1.0kb downstream 4250 true Chr4: 14060459-14064708 Arabidopsis thaliana
AT4G28450 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14060459-14061458 Arabidopsis thaliana
AT4G28450 2.0kb upstream 2.0kb upstream 5250 true Chr4: 14061459-14066708 Arabidopsis thaliana
AT4G28450 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14064709-14066708 Arabidopsis thaliana
AT4G28450 2.0kb downstream 2.0kb downstream 5250 true Chr4: 14059459-14064708 Arabidopsis thaliana
AT4G28450 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14059459-14061458 Arabidopsis thaliana
AT4G28450 5.0kb upstream 5.0kb upstream 8250 true Chr4: 14061459-14069708 Arabidopsis thaliana
AT4G28450 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14064709-14069708 Arabidopsis thaliana
AT4G28450 5.0kb downstream 5.0kb downstream 8250 true Chr4: 14056459-14064708 Arabidopsis thaliana
AT4G28450 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14056459-14061458 Arabidopsis thaliana
AT4G28450 10.0kb upstream 10.0kb upstream 13250 true Chr4: 14061459-14074708 Arabidopsis thaliana
AT4G28450 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14064709-14074708 Arabidopsis thaliana
AT4G28450 10.0kb downstream 10.0kb downstream 13250 true Chr4: 14051459-14064708 Arabidopsis thaliana
AT4G28450 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14051459-14061458 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362244 5261 Brassicaceae View MSA
123831868 5264 Brassicales-Malvales View MSA
124340582 5266 SBM View MSA
124241754 5268 Malvidae View MSA
124063695 5270 Rosid View MSA
123748291 5271 Pentapetalae View MSA
122792543 5272 Eudicot View MSA
122047654 5273 Angiosperm View MSA
121347160 5274 Embryophyte View MSA
123425121 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.414        
cufflinks 9.457        
cufflinks 5.746        
cufflinks 10.054        
cufflinks 4.81       Low
cufflinks 12.548       High

0 Strain