Gene : AT4G28420 A. thaliana TAIR10
Defline:  (1 of 7) K00815 - tyrosine aminotransferase (TAT) Genomic Order:  2866
Name:  ? AT4G28420 Secondary Identifier:  ? PAC:19648849
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28420 0.5kb upstream 0.5kb upstream 2432 true Chr4: 14055161-14057592 Arabidopsis thaliana
AT4G28420 0.5kb upstream 0.5kb upstream 500 false Chr4: 14055161-14055660 Arabidopsis thaliana
AT4G28420 0.5kb downstream 0.5kb downstream 2432 true Chr4: 14055661-14058092 Arabidopsis thaliana
AT4G28420 0.5kb downstream 0.5kb downstream 500 false Chr4: 14057593-14058092 Arabidopsis thaliana
AT4G28420 1.0kb upstream 1.0kb upstream 2932 true Chr4: 14054661-14057592 Arabidopsis thaliana
AT4G28420 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14054661-14055660 Arabidopsis thaliana
AT4G28420 1.0kb downstream 1.0kb downstream 2932 true Chr4: 14055661-14058592 Arabidopsis thaliana
AT4G28420 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14057593-14058592 Arabidopsis thaliana
AT4G28420 2.0kb upstream 2.0kb upstream 3932 true Chr4: 14053661-14057592 Arabidopsis thaliana
AT4G28420 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14053661-14055660 Arabidopsis thaliana
AT4G28420 2.0kb downstream 2.0kb downstream 3932 true Chr4: 14055661-14059592 Arabidopsis thaliana
AT4G28420 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14057593-14059592 Arabidopsis thaliana
AT4G28420 5.0kb upstream 5.0kb upstream 6932 true Chr4: 14050661-14057592 Arabidopsis thaliana
AT4G28420 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14050661-14055660 Arabidopsis thaliana
AT4G28420 5.0kb downstream 5.0kb downstream 6932 true Chr4: 14055661-14062592 Arabidopsis thaliana
AT4G28420 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14057593-14062592 Arabidopsis thaliana
AT4G28420 10.0kb upstream 10.0kb upstream 11932 true Chr4: 14045661-14057592 Arabidopsis thaliana
AT4G28420 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14045661-14055660 Arabidopsis thaliana
AT4G28420 10.0kb downstream 10.0kb downstream 11932 true Chr4: 14055661-14067592 Arabidopsis thaliana
AT4G28420 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14057593-14067592 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510881 5273 Angiosperm View MSA
122369371 5261 Brassicaceae View MSA
123799765 5264 Brassicales-Malvales View MSA
124297254 5266 SBM View MSA
124149193 5268 Malvidae View MSA
123875048 5270 Rosid View MSA
123458931 5271 Pentapetalae View MSA
122494328 5272 Eudicot View MSA
120783956 5274 Embryophyte View MSA
122825906 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.265     Low High
cufflinks 0.031     Low  
cufflinks 0.056     Low  
cufflinks 0.043     Low  
cufflinks 0.104     Low  
cufflinks 0.014     Low Low

0 Strain