Gene : AT4G28320 A. thaliana TAIR10
Defline:  (1 of 2) PTHR31451//PTHR31451:SF1 - FAMILY NOT NAMED // MANNAN ENDO-1,4-BETA-MANNOSIDASE 2-RELATED Genomic Order:  2852
Name:  ? AT4G28320 Secondary Identifier:  ? PAC:19647566
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28320 0.5kb upstream 0.5kb upstream 2569 true Chr4: 14018183-14020751 Arabidopsis thaliana
AT4G28320 0.5kb upstream 0.5kb upstream 500 false Chr4: 14020252-14020751 Arabidopsis thaliana
AT4G28320 0.5kb downstream 0.5kb downstream 2569 true Chr4: 14017683-14020251 Arabidopsis thaliana
AT4G28320 0.5kb downstream 0.5kb downstream 500 false Chr4: 14017683-14018182 Arabidopsis thaliana
AT4G28320 1.0kb upstream 1.0kb upstream 3069 true Chr4: 14018183-14021251 Arabidopsis thaliana
AT4G28320 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14020252-14021251 Arabidopsis thaliana
AT4G28320 1.0kb downstream 1.0kb downstream 3069 true Chr4: 14017183-14020251 Arabidopsis thaliana
AT4G28320 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14017183-14018182 Arabidopsis thaliana
AT4G28320 2.0kb upstream 2.0kb upstream 4069 true Chr4: 14018183-14022251 Arabidopsis thaliana
AT4G28320 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14020252-14022251 Arabidopsis thaliana
AT4G28320 2.0kb downstream 2.0kb downstream 4069 true Chr4: 14016183-14020251 Arabidopsis thaliana
AT4G28320 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14016183-14018182 Arabidopsis thaliana
AT4G28320 5.0kb upstream 5.0kb upstream 7069 true Chr4: 14018183-14025251 Arabidopsis thaliana
AT4G28320 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14020252-14025251 Arabidopsis thaliana
AT4G28320 5.0kb downstream 5.0kb downstream 7069 true Chr4: 14013183-14020251 Arabidopsis thaliana
AT4G28320 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14013183-14018182 Arabidopsis thaliana
AT4G28320 10.0kb upstream 10.0kb upstream 12069 true Chr4: 14018183-14030251 Arabidopsis thaliana
AT4G28320 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14020252-14030251 Arabidopsis thaliana
AT4G28320 10.0kb downstream 10.0kb downstream 12069 true Chr4: 14008183-14020251 Arabidopsis thaliana
AT4G28320 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14008183-14018182 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360597 5261 Brassicaceae View MSA
123797986 5264 Brassicales-Malvales View MSA
124295677 5266 SBM View MSA
124148051 5268 Malvidae View MSA
123874129 5270 Rosid View MSA
123745616 5271 Pentapetalae View MSA
122797757 5272 Eudicot View MSA
122048761 5273 Angiosperm View MSA
121348976 5274 Embryophyte View MSA
123428551 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.469        
cufflinks 8.303        
cufflinks 2.337        
cufflinks 9.163        
cufflinks 1.779       Low
cufflinks 9.185        

0 Strain