Gene : AT4G28300 A. thaliana TAIR10
Defline:  (1 of 1) PTHR31805//PTHR31805:SF3 - FAMILY NOT NAMED // PROLINE-RICH PROTEIN-RELATED Genomic Order:  2850
Name:  ? AT4G28300 Secondary Identifier:  ? PAC:19643866
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28300 0.5kb upstream 0.5kb upstream 2916 true Chr4: 14014153-14017068 Arabidopsis thaliana
AT4G28300 0.5kb upstream 0.5kb upstream 500 false Chr4: 14014153-14014652 Arabidopsis thaliana
AT4G28300 0.5kb downstream 0.5kb downstream 2916 true Chr4: 14014653-14017568 Arabidopsis thaliana
AT4G28300 0.5kb downstream 0.5kb downstream 500 false Chr4: 14017069-14017568 Arabidopsis thaliana
AT4G28300 1.0kb upstream 1.0kb upstream 3416 true Chr4: 14013653-14017068 Arabidopsis thaliana
AT4G28300 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14013653-14014652 Arabidopsis thaliana
AT4G28300 1.0kb downstream 1.0kb downstream 3416 true Chr4: 14014653-14018068 Arabidopsis thaliana
AT4G28300 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14017069-14018068 Arabidopsis thaliana
AT4G28300 2.0kb upstream 2.0kb upstream 4416 true Chr4: 14012653-14017068 Arabidopsis thaliana
AT4G28300 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14012653-14014652 Arabidopsis thaliana
AT4G28300 2.0kb downstream 2.0kb downstream 4416 true Chr4: 14014653-14019068 Arabidopsis thaliana
AT4G28300 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14017069-14019068 Arabidopsis thaliana
AT4G28300 5.0kb upstream 5.0kb upstream 7416 true Chr4: 14009653-14017068 Arabidopsis thaliana
AT4G28300 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14009653-14014652 Arabidopsis thaliana
AT4G28300 5.0kb downstream 5.0kb downstream 7416 true Chr4: 14014653-14022068 Arabidopsis thaliana
AT4G28300 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14017069-14022068 Arabidopsis thaliana
AT4G28300 10.0kb upstream 10.0kb upstream 12416 true Chr4: 14004653-14017068 Arabidopsis thaliana
AT4G28300 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14004653-14014652 Arabidopsis thaliana
AT4G28300 10.0kb downstream 10.0kb downstream 12416 true Chr4: 14014653-14027068 Arabidopsis thaliana
AT4G28300 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14017069-14027068 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360785 5261 Brassicaceae View MSA
123834013 5264 Brassicales-Malvales View MSA
124346014 5266 SBM View MSA
124238313 5268 Malvidae View MSA
124071409 5270 Rosid View MSA
123740794 5271 Pentapetalae View MSA
122789592 5272 Eudicot View MSA
122050948 5273 Angiosperm View MSA
121350556 5274 Embryophyte View MSA
123427524 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.899       Low
cufflinks 22.009        
cufflinks 19.444        
cufflinks 26.491       High
cufflinks 23.555        
cufflinks 21.038        

0 Strain