Gene : AT4G28380 A. thaliana TAIR10
Defline:  (1 of 164) PF00560 - Leucine Rich Repeat (LRR_1) Genomic Order:  2859
Name:  ? AT4G28380 Secondary Identifier:  ? PAC:19647414
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G28380 0.5kb upstream 0.5kb upstream 1676 true Chr4: 14039756-14041431 Arabidopsis thaliana
AT4G28380 0.5kb upstream 0.5kb upstream 500 false Chr4: 14040932-14041431 Arabidopsis thaliana
AT4G28380 0.5kb downstream 0.5kb downstream 1676 true Chr4: 14039256-14040931 Arabidopsis thaliana
AT4G28380 0.5kb downstream 0.5kb downstream 500 false Chr4: 14039256-14039755 Arabidopsis thaliana
AT4G28380 1.0kb upstream 1.0kb upstream 2176 true Chr4: 14039756-14041931 Arabidopsis thaliana
AT4G28380 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14040932-14041931 Arabidopsis thaliana
AT4G28380 1.0kb downstream 1.0kb downstream 2176 true Chr4: 14038756-14040931 Arabidopsis thaliana
AT4G28380 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14038756-14039755 Arabidopsis thaliana
AT4G28380 2.0kb upstream 2.0kb upstream 3176 true Chr4: 14039756-14042931 Arabidopsis thaliana
AT4G28380 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14040932-14042931 Arabidopsis thaliana
AT4G28380 2.0kb downstream 2.0kb downstream 3176 true Chr4: 14037756-14040931 Arabidopsis thaliana
AT4G28380 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14037756-14039755 Arabidopsis thaliana
AT4G28380 5.0kb upstream 5.0kb upstream 6176 true Chr4: 14039756-14045931 Arabidopsis thaliana
AT4G28380 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14040932-14045931 Arabidopsis thaliana
AT4G28380 5.0kb downstream 5.0kb downstream 6176 true Chr4: 14034756-14040931 Arabidopsis thaliana
AT4G28380 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14034756-14039755 Arabidopsis thaliana
AT4G28380 10.0kb upstream 10.0kb upstream 11176 true Chr4: 14039756-14050931 Arabidopsis thaliana
AT4G28380 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14040932-14050931 Arabidopsis thaliana
AT4G28380 10.0kb downstream 10.0kb downstream 11176 true Chr4: 14029756-14040931 Arabidopsis thaliana
AT4G28380 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14029756-14039755 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365723 5261 Brassicaceae View MSA
123828849 5264 Brassicales-Malvales View MSA
124345745 5266 SBM View MSA
124239773 5268 Malvidae View MSA
124060445 5270 Rosid View MSA
123737371 5271 Pentapetalae View MSA
122793115 5272 Eudicot View MSA
122048760 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121349764 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.052     Low  
cufflinks 0.012     Low Low
cufflinks 0.072     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.067     Low  

0 Strain