Gene : UBP18 A. thaliana TAIR10
Primary Identifier:  ? AT4G31670 Defline:  (1 of 9) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42)
Genomic Order:  3220 Name:  ? AT4G31670
Secondary Identifier:  ? PAC:19646874
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G31670 0.5kb upstream 0.5kb upstream 4225 true Chr4: 15335867-15340091 Arabidopsis thaliana
AT4G31670 0.5kb upstream 0.5kb upstream 500 false Chr4: 15339592-15340091 Arabidopsis thaliana
AT4G31670 0.5kb downstream 0.5kb downstream 4225 true Chr4: 15335367-15339591 Arabidopsis thaliana
AT4G31670 0.5kb downstream 0.5kb downstream 500 false Chr4: 15335367-15335866 Arabidopsis thaliana
AT4G31670 1.0kb upstream 1.0kb upstream 4725 true Chr4: 15335867-15340591 Arabidopsis thaliana
AT4G31670 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15339592-15340591 Arabidopsis thaliana
AT4G31670 1.0kb downstream 1.0kb downstream 4725 true Chr4: 15334867-15339591 Arabidopsis thaliana
AT4G31670 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15334867-15335866 Arabidopsis thaliana
AT4G31670 2.0kb upstream 2.0kb upstream 5725 true Chr4: 15335867-15341591 Arabidopsis thaliana
AT4G31670 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15339592-15341591 Arabidopsis thaliana
AT4G31670 2.0kb downstream 2.0kb downstream 5725 true Chr4: 15333867-15339591 Arabidopsis thaliana
AT4G31670 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15333867-15335866 Arabidopsis thaliana
AT4G31670 5.0kb upstream 5.0kb upstream 8725 true Chr4: 15335867-15344591 Arabidopsis thaliana
AT4G31670 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15339592-15344591 Arabidopsis thaliana
AT4G31670 5.0kb downstream 5.0kb downstream 8725 true Chr4: 15330867-15339591 Arabidopsis thaliana
AT4G31670 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15330867-15335866 Arabidopsis thaliana
AT4G31670 10.0kb upstream 10.0kb upstream 13725 true Chr4: 15335867-15349591 Arabidopsis thaliana
AT4G31670 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15339592-15349591 Arabidopsis thaliana
AT4G31670 10.0kb downstream 10.0kb downstream 13725 true Chr4: 15325867-15339591 Arabidopsis thaliana
AT4G31670 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15325867-15335866 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367050 5261 Brassicaceae View MSA
123799287 5264 Brassicales-Malvales View MSA
124350322 5266 SBM View MSA
124238605 5268 Malvidae View MSA
124069619 5270 Rosid View MSA
123738264 5271 Pentapetalae View MSA
122797340 5272 Eudicot View MSA
122048060 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.489        
cufflinks 4.129        
cufflinks 4.545        
cufflinks 4.446        
cufflinks 4.633        
cufflinks 3.919       Low

0 Strain