Gene : AT4G31000 A. thaliana TAIR10
Defline:  (1 of 3) PTHR31713:SF11 - CALMODULIN-BINDING PROTEIN-RELATED Genomic Order:  3148
Name:  ? AT4G31000 Secondary Identifier:  ? PAC:19648574
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G31000 0.5kb upstream 0.5kb upstream 3321 true Chr4: 15102659-15105979 Arabidopsis thaliana
AT4G31000 0.5kb upstream 0.5kb upstream 500 false Chr4: 15102659-15103158 Arabidopsis thaliana
AT4G31000 0.5kb downstream 0.5kb downstream 3321 true Chr4: 15103159-15106479 Arabidopsis thaliana
AT4G31000 0.5kb downstream 0.5kb downstream 500 false Chr4: 15105980-15106479 Arabidopsis thaliana
AT4G31000 1.0kb upstream 1.0kb upstream 3821 true Chr4: 15102159-15105979 Arabidopsis thaliana
AT4G31000 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15102159-15103158 Arabidopsis thaliana
AT4G31000 1.0kb downstream 1.0kb downstream 3821 true Chr4: 15103159-15106979 Arabidopsis thaliana
AT4G31000 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15105980-15106979 Arabidopsis thaliana
AT4G31000 2.0kb upstream 2.0kb upstream 4821 true Chr4: 15101159-15105979 Arabidopsis thaliana
AT4G31000 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15101159-15103158 Arabidopsis thaliana
AT4G31000 2.0kb downstream 2.0kb downstream 4821 true Chr4: 15103159-15107979 Arabidopsis thaliana
AT4G31000 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15105980-15107979 Arabidopsis thaliana
AT4G31000 5.0kb upstream 5.0kb upstream 7821 true Chr4: 15098159-15105979 Arabidopsis thaliana
AT4G31000 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15098159-15103158 Arabidopsis thaliana
AT4G31000 5.0kb downstream 5.0kb downstream 7821 true Chr4: 15103159-15110979 Arabidopsis thaliana
AT4G31000 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15105980-15110979 Arabidopsis thaliana
AT4G31000 10.0kb upstream 10.0kb upstream 12821 true Chr4: 15093159-15105979 Arabidopsis thaliana
AT4G31000 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15093159-15103158 Arabidopsis thaliana
AT4G31000 10.0kb downstream 10.0kb downstream 12821 true Chr4: 15103159-15115979 Arabidopsis thaliana
AT4G31000 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15105980-15115979 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041199 5273 Angiosperm View MSA
122371352 5261 Brassicaceae View MSA
123800147 5264 Brassicales-Malvales View MSA
124297594 5266 SBM View MSA
124149441 5268 Malvidae View MSA
123875249 5270 Rosid View MSA
123753678 5271 Pentapetalae View MSA
122786667 5272 Eudicot View MSA
121350867 5274 Embryophyte View MSA
123381913 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.11        
cufflinks 21.591        
cufflinks 3.262        
cufflinks 19.53        
cufflinks 1.521       Low
cufflinks 25.061        

0 Strain