Gene : SDG4 A. thaliana TAIR10
Primary Identifier:  ? AT4G30860 Defline:  (1 of 1) PTHR22884//PTHR22884:SF285 - SET DOMAIN PROTEINS // HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3
Genomic Order:  3131 Name:  ? AT4G30860
Secondary Identifier:  ? PAC:19647194
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Expression

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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30860 0.5kb upstream 0.5kb upstream 3645 true Chr4: 15023972-15027616 Arabidopsis thaliana
AT4G30860 0.5kb upstream 0.5kb upstream 500 false Chr4: 15023972-15024471 Arabidopsis thaliana
AT4G30860 0.5kb downstream 0.5kb downstream 3645 true Chr4: 15024472-15028116 Arabidopsis thaliana
AT4G30860 0.5kb downstream 0.5kb downstream 500 false Chr4: 15027617-15028116 Arabidopsis thaliana
AT4G30860 1.0kb upstream 1.0kb upstream 4145 true Chr4: 15023472-15027616 Arabidopsis thaliana
AT4G30860 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15023472-15024471 Arabidopsis thaliana
AT4G30860 1.0kb downstream 1.0kb downstream 4145 true Chr4: 15024472-15028616 Arabidopsis thaliana
AT4G30860 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15027617-15028616 Arabidopsis thaliana
AT4G30860 2.0kb upstream 2.0kb upstream 5145 true Chr4: 15022472-15027616 Arabidopsis thaliana
AT4G30860 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15022472-15024471 Arabidopsis thaliana
AT4G30860 2.0kb downstream 2.0kb downstream 5145 true Chr4: 15024472-15029616 Arabidopsis thaliana
AT4G30860 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15027617-15029616 Arabidopsis thaliana
AT4G30860 5.0kb upstream 5.0kb upstream 8145 true Chr4: 15019472-15027616 Arabidopsis thaliana
AT4G30860 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15019472-15024471 Arabidopsis thaliana
AT4G30860 5.0kb downstream 5.0kb downstream 8145 true Chr4: 15024472-15032616 Arabidopsis thaliana
AT4G30860 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15027617-15032616 Arabidopsis thaliana
AT4G30860 10.0kb upstream 10.0kb upstream 13145 true Chr4: 15014472-15027616 Arabidopsis thaliana
AT4G30860 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15014472-15024471 Arabidopsis thaliana
AT4G30860 10.0kb downstream 10.0kb downstream 13145 true Chr4: 15024472-15037616 Arabidopsis thaliana
AT4G30860 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15027617-15037616 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364126 5261 Brassicaceae View MSA
123828579 5264 Brassicales-Malvales View MSA
124346585 5266 SBM View MSA
124237180 5268 Malvidae View MSA
124066283 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.201        
cufflinks 2.506        
cufflinks 1.691        
cufflinks 2.976        
cufflinks 1.117       Low
cufflinks 3.553       High

0 Strain