Gene : AT4G30880 A. thaliana TAIR10
Defline:  (1 of 5) PTHR33286:SF1 - BIFUNCTIONAL INHIBITOR/LIPID-TRANSFER PROTEIN/SEED STORAGE 2S ALBUMIN SUPERFAMILY PROTEIN-RELATED Genomic Order:  3133
Name:  ? AT4G30880 Secondary Identifier:  ? PAC:19644471
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30880 0.5kb upstream 0.5kb upstream 1137 true Chr4: 15034707-15035843 Arabidopsis thaliana
AT4G30880 0.5kb upstream 0.5kb upstream 500 false Chr4: 15034707-15035206 Arabidopsis thaliana
AT4G30880 0.5kb downstream 0.5kb downstream 1137 true Chr4: 15035207-15036343 Arabidopsis thaliana
AT4G30880 0.5kb downstream 0.5kb downstream 500 false Chr4: 15035844-15036343 Arabidopsis thaliana
AT4G30880 1.0kb upstream 1.0kb upstream 1637 true Chr4: 15034207-15035843 Arabidopsis thaliana
AT4G30880 1.0kb upstream 1.0kb upstream 1000 false Chr4: 15034207-15035206 Arabidopsis thaliana
AT4G30880 1.0kb downstream 1.0kb downstream 1637 true Chr4: 15035207-15036843 Arabidopsis thaliana
AT4G30880 1.0kb downstream 1.0kb downstream 1000 false Chr4: 15035844-15036843 Arabidopsis thaliana
AT4G30880 2.0kb upstream 2.0kb upstream 2637 true Chr4: 15033207-15035843 Arabidopsis thaliana
AT4G30880 2.0kb upstream 2.0kb upstream 2000 false Chr4: 15033207-15035206 Arabidopsis thaliana
AT4G30880 2.0kb downstream 2.0kb downstream 2637 true Chr4: 15035207-15037843 Arabidopsis thaliana
AT4G30880 2.0kb downstream 2.0kb downstream 2000 false Chr4: 15035844-15037843 Arabidopsis thaliana
AT4G30880 5.0kb upstream 5.0kb upstream 5637 true Chr4: 15030207-15035843 Arabidopsis thaliana
AT4G30880 5.0kb upstream 5.0kb upstream 5000 false Chr4: 15030207-15035206 Arabidopsis thaliana
AT4G30880 5.0kb downstream 5.0kb downstream 5637 true Chr4: 15035207-15040843 Arabidopsis thaliana
AT4G30880 5.0kb downstream 5.0kb downstream 5000 false Chr4: 15035844-15040843 Arabidopsis thaliana
AT4G30880 10.0kb upstream 10.0kb upstream 10637 true Chr4: 15025207-15035843 Arabidopsis thaliana
AT4G30880 10.0kb upstream 10.0kb upstream 10000 false Chr4: 15025207-15035206 Arabidopsis thaliana
AT4G30880 10.0kb downstream 10.0kb downstream 10637 true Chr4: 15035207-15045843 Arabidopsis thaliana
AT4G30880 10.0kb downstream 10.0kb downstream 10000 false Chr4: 15035844-15045843 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374686 5261 Brassicaceae View MSA
123836698 5264 Brassicales-Malvales View MSA
124341404 5266 SBM View MSA
124250886 5268 Malvidae View MSA
124071532 5270 Rosid View MSA
123738328 5271 Pentapetalae View MSA
122795695 5272 Eudicot View MSA
122051357 5273 Angiosperm View MSA
121351204 5274 Embryophyte View MSA
123382050 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.044     Low  
cufflinks 0.431       High
cufflinks 0.026     Low Low
cufflinks 0.134     Low  
cufflinks 0.068     Low  
cufflinks 0.152     Low  

0 Strain