Gene : AT4G30790 A. thaliana TAIR10
Defline:  (1 of 1) PTHR13222 - CGTHBA PROTEIN -14 GENE PROTEIN Genomic Order:  3122
Name:  ? AT4G30790 Secondary Identifier:  ? PAC:19643939
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30790 0.5kb upstream 0.5kb upstream 5200 true Chr4: 14993086-14998285 Arabidopsis thaliana
AT4G30790 0.5kb upstream 0.5kb upstream 500 false Chr4: 14997786-14998285 Arabidopsis thaliana
AT4G30790 0.5kb downstream 0.5kb downstream 5200 true Chr4: 14992586-14997785 Arabidopsis thaliana
AT4G30790 0.5kb downstream 0.5kb downstream 500 false Chr4: 14992586-14993085 Arabidopsis thaliana
AT4G30790 1.0kb upstream 1.0kb upstream 5700 true Chr4: 14993086-14998785 Arabidopsis thaliana
AT4G30790 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14997786-14998785 Arabidopsis thaliana
AT4G30790 1.0kb downstream 1.0kb downstream 5700 true Chr4: 14992086-14997785 Arabidopsis thaliana
AT4G30790 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14992086-14993085 Arabidopsis thaliana
AT4G30790 2.0kb upstream 2.0kb upstream 6700 true Chr4: 14993086-14999785 Arabidopsis thaliana
AT4G30790 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14997786-14999785 Arabidopsis thaliana
AT4G30790 2.0kb downstream 2.0kb downstream 6700 true Chr4: 14991086-14997785 Arabidopsis thaliana
AT4G30790 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14991086-14993085 Arabidopsis thaliana
AT4G30790 5.0kb upstream 5.0kb upstream 9700 true Chr4: 14993086-15002785 Arabidopsis thaliana
AT4G30790 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14997786-15002785 Arabidopsis thaliana
AT4G30790 5.0kb downstream 5.0kb downstream 9700 true Chr4: 14988086-14997785 Arabidopsis thaliana
AT4G30790 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14988086-14993085 Arabidopsis thaliana
AT4G30790 10.0kb upstream 10.0kb upstream 14700 true Chr4: 14993086-15007785 Arabidopsis thaliana
AT4G30790 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14997786-15007785 Arabidopsis thaliana
AT4G30790 10.0kb downstream 10.0kb downstream 14700 true Chr4: 14983086-14997785 Arabidopsis thaliana
AT4G30790 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14983086-14993085 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378401 5261 Brassicaceae View MSA
123831549 5264 Brassicales-Malvales View MSA
124346799 5266 SBM View MSA
124251891 5268 Malvidae View MSA
124067253 5270 Rosid View MSA
123739530 5271 Pentapetalae View MSA
122788917 5272 Eudicot View MSA
122042921 5273 Angiosperm View MSA
121347575 5274 Embryophyte View MSA
123423809 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.494       High
cufflinks 8.411       Low
cufflinks 9.337        
cufflinks 10.563        
cufflinks 10.978        
cufflinks 8.552       Low

0 Strain