Gene : AT4G30520 A. thaliana TAIR10
Defline:  (1 of 9) PF00560//PF07714//PF08263 - Leucine Rich Repeat (LRR_1) // Protein tyrosine kinase (Pkinase_Tyr) // Leucine rich repeat N-terminal domain (LRRNT_2) Genomic Order:  3094
Name:  ? AT4G30520 Secondary Identifier:  ? PAC:19647645
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30520 0.5kb upstream 0.5kb upstream 3808 true Chr4: 14908000-14911807 Arabidopsis thaliana
AT4G30520 0.5kb upstream 0.5kb upstream 500 false Chr4: 14911308-14911807 Arabidopsis thaliana
AT4G30520 0.5kb downstream 0.5kb downstream 3808 true Chr4: 14907500-14911307 Arabidopsis thaliana
AT4G30520 0.5kb downstream 0.5kb downstream 500 false Chr4: 14907500-14907999 Arabidopsis thaliana
AT4G30520 1.0kb upstream 1.0kb upstream 4308 true Chr4: 14908000-14912307 Arabidopsis thaliana
AT4G30520 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14911308-14912307 Arabidopsis thaliana
AT4G30520 1.0kb downstream 1.0kb downstream 4308 true Chr4: 14907000-14911307 Arabidopsis thaliana
AT4G30520 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14907000-14907999 Arabidopsis thaliana
AT4G30520 2.0kb upstream 2.0kb upstream 5308 true Chr4: 14908000-14913307 Arabidopsis thaliana
AT4G30520 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14911308-14913307 Arabidopsis thaliana
AT4G30520 2.0kb downstream 2.0kb downstream 5308 true Chr4: 14906000-14911307 Arabidopsis thaliana
AT4G30520 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14906000-14907999 Arabidopsis thaliana
AT4G30520 5.0kb upstream 5.0kb upstream 8308 true Chr4: 14908000-14916307 Arabidopsis thaliana
AT4G30520 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14911308-14916307 Arabidopsis thaliana
AT4G30520 5.0kb downstream 5.0kb downstream 8308 true Chr4: 14903000-14911307 Arabidopsis thaliana
AT4G30520 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14903000-14907999 Arabidopsis thaliana
AT4G30520 10.0kb upstream 10.0kb upstream 13308 true Chr4: 14908000-14921307 Arabidopsis thaliana
AT4G30520 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14911308-14921307 Arabidopsis thaliana
AT4G30520 10.0kb downstream 10.0kb downstream 13308 true Chr4: 14898000-14911307 Arabidopsis thaliana
AT4G30520 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14898000-14907999 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361260 5261 Brassicaceae View MSA
123837545 5264 Brassicales-Malvales View MSA
124339832 5266 SBM View MSA
124242752 5268 Malvidae View MSA
124063050 5270 Rosid View MSA
123736921 5271 Pentapetalae View MSA
122790705 5272 Eudicot View MSA
122048314 5273 Angiosperm View MSA
121310927 5274 Embryophyte View MSA
123348299 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.858        
cufflinks 16.429        
cufflinks 2.695        
cufflinks 15.169        
cufflinks 2.208       Low
cufflinks 13.89        

0 Strain