Gene : AT4G30540 A. thaliana TAIR10
Defline:  (1 of 5) PTHR11922:SF42 - CLASS I GLUTAMINE AMIDOTRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3096
Name:  ? AT4G30540 Secondary Identifier:  ? PAC:19648833
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30540 0.5kb upstream 0.5kb upstream 2280 true Chr4: 14922827-14925106 Arabidopsis thaliana
AT4G30540 0.5kb upstream 0.5kb upstream 500 false Chr4: 14922827-14923326 Arabidopsis thaliana
AT4G30540 0.5kb downstream 0.5kb downstream 2280 true Chr4: 14923327-14925606 Arabidopsis thaliana
AT4G30540 0.5kb downstream 0.5kb downstream 500 false Chr4: 14925107-14925606 Arabidopsis thaliana
AT4G30540 1.0kb upstream 1.0kb upstream 2780 true Chr4: 14922327-14925106 Arabidopsis thaliana
AT4G30540 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14922327-14923326 Arabidopsis thaliana
AT4G30540 1.0kb downstream 1.0kb downstream 2780 true Chr4: 14923327-14926106 Arabidopsis thaliana
AT4G30540 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14925107-14926106 Arabidopsis thaliana
AT4G30540 2.0kb upstream 2.0kb upstream 3780 true Chr4: 14921327-14925106 Arabidopsis thaliana
AT4G30540 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14921327-14923326 Arabidopsis thaliana
AT4G30540 2.0kb downstream 2.0kb downstream 3780 true Chr4: 14923327-14927106 Arabidopsis thaliana
AT4G30540 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14925107-14927106 Arabidopsis thaliana
AT4G30540 5.0kb upstream 5.0kb upstream 6780 true Chr4: 14918327-14925106 Arabidopsis thaliana
AT4G30540 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14918327-14923326 Arabidopsis thaliana
AT4G30540 5.0kb downstream 5.0kb downstream 6780 true Chr4: 14923327-14930106 Arabidopsis thaliana
AT4G30540 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14925107-14930106 Arabidopsis thaliana
AT4G30540 10.0kb upstream 10.0kb upstream 11780 true Chr4: 14913327-14925106 Arabidopsis thaliana
AT4G30540 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14913327-14923326 Arabidopsis thaliana
AT4G30540 10.0kb downstream 10.0kb downstream 11780 true Chr4: 14923327-14935106 Arabidopsis thaliana
AT4G30540 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14925107-14935106 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121511580 5273 Angiosperm View MSA
122377479 5261 Brassicaceae View MSA
123801541 5264 Brassicales-Malvales View MSA
124298831 5266 SBM View MSA
124150386 5268 Malvidae View MSA
123876007 5270 Rosid View MSA
123459744 5271 Pentapetalae View MSA
122495131 5272 Eudicot View MSA
121350847 5274 Embryophyte View MSA
123426192 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.009     Low Low
cufflinks 0.264     Low  
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.539        
cufflinks 0.0     Not Expressed Not Expressed
cufflinks 0.07     Low  

0 Strain