Gene : AT4G30550 A. thaliana TAIR10
Defline:  (1 of 5) PTHR11922:SF42 - CLASS I GLUTAMINE AMIDOTRANSFERASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3097
Name:  ? AT4G30550 Secondary Identifier:  ? PAC:19646580
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30550 0.5kb upstream 0.5kb upstream 1952 true Chr4: 14924910-14926861 Arabidopsis thaliana
AT4G30550 0.5kb upstream 0.5kb upstream 500 false Chr4: 14924910-14925409 Arabidopsis thaliana
AT4G30550 0.5kb downstream 0.5kb downstream 1952 true Chr4: 14925410-14927361 Arabidopsis thaliana
AT4G30550 0.5kb downstream 0.5kb downstream 500 false Chr4: 14926862-14927361 Arabidopsis thaliana
AT4G30550 1.0kb upstream 1.0kb upstream 2452 true Chr4: 14924410-14926861 Arabidopsis thaliana
AT4G30550 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14924410-14925409 Arabidopsis thaliana
AT4G30550 1.0kb downstream 1.0kb downstream 2452 true Chr4: 14925410-14927861 Arabidopsis thaliana
AT4G30550 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14926862-14927861 Arabidopsis thaliana
AT4G30550 2.0kb upstream 2.0kb upstream 3452 true Chr4: 14923410-14926861 Arabidopsis thaliana
AT4G30550 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14923410-14925409 Arabidopsis thaliana
AT4G30550 2.0kb downstream 2.0kb downstream 3452 true Chr4: 14925410-14928861 Arabidopsis thaliana
AT4G30550 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14926862-14928861 Arabidopsis thaliana
AT4G30550 5.0kb upstream 5.0kb upstream 6452 true Chr4: 14920410-14926861 Arabidopsis thaliana
AT4G30550 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14920410-14925409 Arabidopsis thaliana
AT4G30550 5.0kb downstream 5.0kb downstream 6452 true Chr4: 14925410-14931861 Arabidopsis thaliana
AT4G30550 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14926862-14931861 Arabidopsis thaliana
AT4G30550 10.0kb upstream 10.0kb upstream 11452 true Chr4: 14915410-14926861 Arabidopsis thaliana
AT4G30550 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14915410-14925409 Arabidopsis thaliana
AT4G30550 10.0kb downstream 10.0kb downstream 11452 true Chr4: 14925410-14936861 Arabidopsis thaliana
AT4G30550 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14926862-14936861 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361762 5261 Brassicaceae View MSA
123840878 5264 Brassicales-Malvales View MSA
124345179 5266 SBM View MSA
124239576 5268 Malvidae View MSA
124070064 5270 Rosid View MSA
123742597 5271 Pentapetalae View MSA
122795576 5272 Eudicot View MSA
122050443 5273 Angiosperm View MSA
121350847 5274 Embryophyte View MSA
123426192 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 29.529     High  
cufflinks 36.089     High  
cufflinks 21.857       Low
cufflinks 39.882     High  
cufflinks 26.684     High  
cufflinks 41.066     High High

0 Strain