Gene : AT4G30500 A. thaliana TAIR10
Defline:  (1 of 2) PTHR13505:SF7 - TRANSMEMBRANE PROTEIN 208 Genomic Order:  3092
Name:  ? AT4G30500 Secondary Identifier:  ? PAC:19644547
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
AT4G30500 0.5kb upstream 0.5kb upstream 1931 true Chr4: 14902987-14904917 Arabidopsis thaliana
AT4G30500 0.5kb upstream 0.5kb upstream 500 false Chr4: 14902987-14903486 Arabidopsis thaliana
AT4G30500 0.5kb downstream 0.5kb downstream 1931 true Chr4: 14903487-14905417 Arabidopsis thaliana
AT4G30500 0.5kb downstream 0.5kb downstream 500 false Chr4: 14904918-14905417 Arabidopsis thaliana
AT4G30500 1.0kb upstream 1.0kb upstream 2431 true Chr4: 14902487-14904917 Arabidopsis thaliana
AT4G30500 1.0kb upstream 1.0kb upstream 1000 false Chr4: 14902487-14903486 Arabidopsis thaliana
AT4G30500 1.0kb downstream 1.0kb downstream 2431 true Chr4: 14903487-14905917 Arabidopsis thaliana
AT4G30500 1.0kb downstream 1.0kb downstream 1000 false Chr4: 14904918-14905917 Arabidopsis thaliana
AT4G30500 2.0kb upstream 2.0kb upstream 3431 true Chr4: 14901487-14904917 Arabidopsis thaliana
AT4G30500 2.0kb upstream 2.0kb upstream 2000 false Chr4: 14901487-14903486 Arabidopsis thaliana
AT4G30500 2.0kb downstream 2.0kb downstream 3431 true Chr4: 14903487-14906917 Arabidopsis thaliana
AT4G30500 2.0kb downstream 2.0kb downstream 2000 false Chr4: 14904918-14906917 Arabidopsis thaliana
AT4G30500 5.0kb upstream 5.0kb upstream 6431 true Chr4: 14898487-14904917 Arabidopsis thaliana
AT4G30500 5.0kb upstream 5.0kb upstream 5000 false Chr4: 14898487-14903486 Arabidopsis thaliana
AT4G30500 5.0kb downstream 5.0kb downstream 6431 true Chr4: 14903487-14909917 Arabidopsis thaliana
AT4G30500 5.0kb downstream 5.0kb downstream 5000 false Chr4: 14904918-14909917 Arabidopsis thaliana
AT4G30500 10.0kb upstream 10.0kb upstream 11431 true Chr4: 14893487-14904917 Arabidopsis thaliana
AT4G30500 10.0kb upstream 10.0kb upstream 10000 false Chr4: 14893487-14903486 Arabidopsis thaliana
AT4G30500 10.0kb downstream 10.0kb downstream 11431 true Chr4: 14903487-14914917 Arabidopsis thaliana
AT4G30500 10.0kb downstream 10.0kb downstream 10000 false Chr4: 14904918-14914917 Arabidopsis thaliana

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121502714 5273 Angiosperm View MSA
122343459 5261 Brassicaceae View MSA
123783651 5264 Brassicales-Malvales View MSA
124281872 5266 SBM View MSA
124136555 5268 Malvidae View MSA
123864398 5270 Rosid View MSA
123449713 5271 Pentapetalae View MSA
122485243 5272 Eudicot View MSA
120776020 5274 Embryophyte View MSA
123425325 5275 Viridiplantae View MSA

6 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.163       High
cufflinks 2.871        
cufflinks 4.248        
cufflinks 3.886        
cufflinks 2.711       Low
cufflinks 4.446        

0 Strain